clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF025J09 | Sequence | 812 | 003354 (14) | ref|XP_008778217.1| | 4e-123 | PREDICTED: quinone oxidoreductase PIG3 isoform X2 [Phoenix dactylifera] | |||||
JMFF051K18 | Sequence | 597 | 003354 (14) | ref|XP_009593200.1| | 1e-111 | PREDICTED: quinone oxidoreductase PIG3 [Nicotiana tomentosiformis] | 604 | 003354 (14) | ref|XP_010268800.1| | 2e-73 | PREDICTED: quinone oxidoreductase PIG3 [Nelumbo nucifera] |
JMFN035A21 | Sequence | 610 | 003354 (14) | ref|XP_009593200.1| | 1e-111 | PREDICTED: quinone oxidoreductase PIG3 [Nicotiana tomentosiformis] | |||||
JMFN042C01 | Sequence | 620 | 003354 (14) | gb|EPS65768.1| | 4e-112 | hypothetical protein M569_09009, partial [Genlisea aurea] | |||||
JMFN042O15 | Sequence | 620 | 003354 (14) | gb|EPS65768.1| | 6e-103 | hypothetical protein M569_09009, partial [Genlisea aurea] | |||||
JMSF021B05 | Sequence | 681 | 003354 (14) | ref|XP_009593200.1| | 7e-132 | PREDICTED: quinone oxidoreductase PIG3 [Nicotiana tomentosiformis] | 753 | 003354 (14) | ref|XP_008778217.1| | 7e-125 | PREDICTED: quinone oxidoreductase PIG3 isoform X2 [Phoenix dactylifera] |
JMSF031K24 | Sequence | 606 | 003354 (14) | gb|EPS65768.1| | 9e-106 | hypothetical protein M569_09009, partial [Genlisea aurea] | 706 | 003354 (14) | ref|XP_008778217.1| | 4e-115 | PREDICTED: quinone oxidoreductase PIG3 isoform X2 [Phoenix dactylifera] |
JMSF043H22 | Sequence | 793 | 003354 (14) | ref|XP_009593200.1| | 3e-152 | PREDICTED: quinone oxidoreductase PIG3 [Nicotiana tomentosiformis] | 795 | 003354 (14) | ref|XP_008778217.1| | 3e-115 | PREDICTED: quinone oxidoreductase PIG3 isoform X2 [Phoenix dactylifera] |
JMSF050J09 | Sequence | 661 | 003354 (14) | ref|XP_009593200.1| | 4e-128 | PREDICTED: quinone oxidoreductase PIG3 [Nicotiana tomentosiformis] | 764 | 003354 (14) | ref|XP_009593200.1| | 1e-141 | PREDICTED: quinone oxidoreductase PIG3 [Nicotiana tomentosiformis] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig003354============================================1291 56 --------------------------------------------->JMFF051K18 <----------------------------------------------rJMFF051K18 100 ---------------------------------------------->JMSF031K24 <------------------------------------------------------rJMSF031K24 104 ------------------------------------------------------------>JMSF043H22 <-----------------------------------------------------------rJMSF043H22 126 ---------------------------------------------------->JMSF021B05 <---------------------------------------------------------rJMSF021B05 190 -------------------------------------------------->JMSF050J09 <----------------------------------------------------------rJMSF050J09
The following clones don't have the opposite end in this pair.
----------------------------------------------->JMFN042O15- <--------------------------------------------------------------rJMFF025J09- ---------------------------------------------->JMFN035A21- ----------------------------------------------->JMFN042C01-