List of clones in pair P015969.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF024B07Sequence378008842 (16)gb|AAQ23134.1|9e-51thioredoxin H1 [Ipomoea batatas]680008842 (16)gb|AAQ23134.1|2e-53thioredoxin H1 [Ipomoea batatas]
JMFF033F22Sequence524008842 (16)gb|AAQ23134.1|2e-54thioredoxin H1 [Ipomoea batatas]658008842 (16)gb|AAQ23134.1|1e-53thioredoxin H1 [Ipomoea batatas]
JMFF038G11Sequence506008842 (16)gb|AAQ23134.1|2e-53thioredoxin H1 [Ipomoea batatas]732008842 (16)gb|AAQ23134.1|3e-53thioredoxin H1 [Ipomoea batatas]
JMFN005C19Sequence633008842 (16)gb|AAQ23134.1|1e-53thioredoxin H1 [Ipomoea batatas]
JMFN020A04Sequence622008842 (16)gb|AAQ23134.1|1e-53thioredoxin H1 [Ipomoea batatas]
JMFN032H19Sequence625008842 (16)gb|AAQ23134.1|9e-54thioredoxin H1 [Ipomoea batatas]
JMFN034D19Sequence626008842 (16)gb|AAQ23134.1|9e-54thioredoxin H1 [Ipomoea batatas]
JMFN037P14Sequence615008842 (16)gb|AAQ23134.1|8e-54thioredoxin H1 [Ipomoea batatas]
JMFS169F10Sequence611008842 (16)gb|AAQ23134.1|8e-54thioredoxin H1 [Ipomoea batatas]
JMSF021O14Sequence677008842 (16)gb|AAQ23134.1|2e-53thioredoxin H1 [Ipomoea batatas]628008842 (16)gb|AAQ23134.1|9e-54thioredoxin H1 [Ipomoea batatas]
JMSF042J19Sequence755008842 (16)gb|AAQ23134.1|2e-46thioredoxin H1 [Ipomoea batatas]722008842 (16)gb|AAQ23134.1|1e-46thioredoxin H1 [Ipomoea batatas]

Contig 8842 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig008842============================================ 880         
 144 -------------------------------------------------------->JMFF038G11                                              
      <----------------------------------------------------------------------------------rJMFF038G11  
 164               ------------------------------------------------------------------------------------->JMSF042J19   
                   <--------------------------------------------------------------------------------rJMSF042J19  
 171              ----------------------------------------->JMFF024B07                                                
                     <----------------------------------------------------------------------------rJMFF024B07  
 236              ----------------------------------------------------------->JMFF033F22                              
                  <------------------------------------------------------------------------rJMFF033F22  
 253              ---------------------------------------------------------------------------->JMSF021O14             
                  <----------------------------------------------------------------------rJMSF021O14

The following clones don't have the opposite end in this pair.

                       ---------------------------------------------------------------------->JMFN034D19-             
                    --------------------------------------------------------------------->JMFN037P14-                 
          ---------------------------------------------------------------------->JMFN020A04-                          
                    -------------------------------------------------------------------->JMFS169F10-                  
                    ----------------------------------------------------------------------->JMFN005C19-               
                   ---------------------------------------------------------------------->JMFN032H19-