| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF013L22 | Sequence | 558 | 011227 (22) | emb|CDP05387.1| | 2e-99 | unnamed protein product [Coffea canephora] | 776 | 011227 (22) | gb|EPS57400.1| | 2e-103 | hypothetical protein M569_17418, partial [Genlisea aurea] |
| JMFF014M22 | Sequence | 583 | 011227 (22) | emb|CDP05387.1| | 2e-100 | unnamed protein product [Coffea canephora] | 222 | 011227 (22) | |||
| JMFF020H16 | Sequence | 586 | 011227 (22) | emb|CDP05387.1| | 2e-101 | unnamed protein product [Coffea canephora] | 773 | 011227 (22) | ref|XP_002511020.1| | 2e-115 | protein with unknown function [Ricinus communis] gb|EEF51622.1| protein with unk |
| JMFF023K12 | Sequence | 479 | 011227 (22) | ref|XP_008376364.1| | 2e-67 | PREDICTED: GTP-binding protein YPTM2 [Malus domestica] | 777 | 011227 (22) | ref|XP_002511020.1| | 3e-85 | protein with unknown function [Ricinus communis] gb|EEF51622.1| protein with unk |
| JMFF051L05 | Sequence | 637 | 011227 (22) | emb|CDP05387.1| | 1e-112 | unnamed protein product [Coffea canephora] | 611 | 011227 (22) | gb|EPS57400.1| | 8e-64 | hypothetical protein M569_17418, partial [Genlisea aurea] |
| JMSF005K18 | Sequence | 423 | 011227 (22) | ref|XP_008376364.1| | 8e-60 | PREDICTED: GTP-binding protein YPTM2 [Malus domestica] | |||||
| JMSF023F18 | Sequence | 654 | 011227 (22) | emb|CDP05387.1| | 4e-117 | unnamed protein product [Coffea canephora] | 775 | 011227 (22) | ref|XP_002511020.1| | 2e-115 | protein with unknown function [Ricinus communis] gb|EEF51622.1| protein with unk |
| JMSF034K18 | Sequence | 656 | 011227 (22) | emb|CDP05387.1| | 5e-117 | unnamed protein product [Coffea canephora] | 754 | 011227 (22) | ref|XP_002511020.1| | 3e-112 | protein with unknown function [Ricinus communis] gb|EEF51622.1| protein with unk |
| JMSF036O10 | Sequence | 648 | 011227 (22) | emb|CDP05387.1| | 9e-116 | unnamed protein product [Coffea canephora] | 757 | 011227 (22) | ref|XP_002511020.1| | 4e-105 | protein with unknown function [Ricinus communis] gb|EEF51622.1| protein with unk |
| JMSF049N05 | Sequence | 655 | 011227 (22) | emb|CDP05387.1| | 6e-117 | unnamed protein product [Coffea canephora] | 736 | 011227 (22) | ref|XP_002511020.1| | 1e-110 | protein with unknown function [Ricinus communis] gb|EEF51622.1| protein with unk |
| JMSF052N19 | Sequence | 648 | 011227 (22) | emb|CDP05387.1| | 1e-115 | unnamed protein product [Coffea canephora] | 861 | 011227 (22) | ref|XP_002511020.1| | 3e-139 | protein with unknown function [Ricinus communis] gb|EEF51622.1| protein with unk |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig011227============================================1036 11 ------------------------------------------------------------->JMFF051L05 <----------------------------------------------------------rJMFF051L05 36 --------------------------------------------->JMFF023K12 <--------------------------------------------------------------------------rJMFF023K12 36 -------------------------------------------------------->JMFF020H16 <--------------------------------------------------------------------------rJMFF020H16 37 -------------------------------------------------------------->JMSF023F18 <--------------------------------------------------------------------------rJMSF023F18 41 ------------------------------------------------------->JMFF014M22 <--------------------rJMFF014M22 53 -------------------------------------------------------------->JMSF052N19 <----------------------------------------------------------------------------------rJMSF052N19 55 ------------------------------------------------------------->JMSF036O10 <-----------------------------------------------------------------------rJMSF036O10 56 -------------------------------------------------------------->JMSF034K18 <-----------------------------------------------------------------------rJMSF034K18 59 -------------------------------------------------------------->JMSF049N05 <----------------------------------------------------------------------rJMSF049N05 60 ----------------------------------------------------->JMFF013L22 <--------------------------------------------------------------------------rJMFF013L22
The following clones don't have the opposite end in this pair.
---------------------------------------->JMSF005K18- <-------------------------------------------------------------------rJMSF008K17*