clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF001I20 | Sequence | 583 | 009694 (10) | ref|XP_011088790.1| | 2e-64 | PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1-like [Sesam | 724 | 009694 (10) | ref|XP_011089953.1| | 1e-86 | PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1-like [Sesam |
JMFF021J03 | Sequence | 583 | 009694 (10) | ref|XP_011088790.1| | 3e-64 | PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1-like [Sesam | 692 | 009694 (10) | ref|XP_011089953.1| | 3e-71 | PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1-like [Sesam |
JMFF032O03 | Sequence | 173 | 009694 (10) | gb|KDP43979.1| | 8e-08 | hypothetical protein JCGZ_05446 [Jatropha curcas] | 759 | 009694 (10) | ref|XP_011089953.1| | 1e-85 | PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1-like [Sesam |
JMFF036M15 | Sequence | 554 | 009694 (10) | ref|XP_011088790.1| | 6e-55 | PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1-like [Sesam | 752 | 009694 (10) | ref|XP_011089953.1| | 3e-93 | PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1-like [Sesam |
JMSF014H17 | Sequence | 489 | 009694 (10) | ref|XP_011088790.1| | 8e-51 | PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1-like [Sesam | 818 | 009694 (10) | ref|XP_006349016.1| | 2e-104 | PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1-like [Solan |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig009694============================================1098 1 ---------------------------------------------------->JMFF021J03 <--------------------------------------------------------------rJMFF021J03 58 ---------------------------------------------------->JMFF001I20 <---------------------------------------------------------------rJMFF001I20 94 ------------------------------------------------->JMFF036M15 <-------------------------------------------------------------------rJMFF036M15 104 ------------------------------------------->JMSF014H17 <--------------------------------------------------------------------------rJMSF014H17 175 --------------->JMFF032O03 <--------------------------------------------------------------------rJMFF032O03
The following clones don't have the opposite end in this pair.