clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMCP015G01 | Sequence | 453 | 008192 (7) | ref|XP_006429231.1| | 8e-33 | hypothetical protein CICLE_v10013135mg [Citrus clementina] ref|XP_006480910.1| P | |||||
JMFF015I17 | Sequence | 579 | 008192 (7) | ref|XP_007026867.1| | 5e-40 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfami | 546 | 008192 (7) | ref|XP_007026867.1| | 4e-40 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfami |
JMSF002J20 | Sequence | 348 | 008192 (7) | gb|KJB46518.1| | 1e-29 | hypothetical protein B456_007G377400 [Gossypium raimondii] | 540 | 008192 (7) | ref|XP_007026867.1| | 4e-40 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfami |
JMSF016L14 | Sequence | 227 | 008192 (7) | ref|XP_007026868.1| | 5e-08 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfami | 541 | 008192 (7) | ref|XP_007026867.1| | 4e-40 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfami |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig008192============================================ 587 47 -------------------------------------->JMSF016L14 <-------------------------------------------------------------------------------------------rJMSF016L14 47 -------------------------------------------------------------------------------------------------->JMFF015I17 <--------------------------------------------------------------------------------------------rJMFF015I17 49 ---------------------------------------------------------->JMSF002J20 <-------------------------------------------------------------------------------------------rJMSF002J20
The following clones don't have the opposite end in this pair.
---------------------------------------------------------------------------->rJMCP015G01-