clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF004H16 | Sequence | 584 | 009482 (15) | ref|XP_009797409.1| | 3e-39 | PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein 3 [Ni | 714 | 009482 (15) | ref|XP_007202329.1| | 2e-126 | hypothetical protein PRUPE_ppa009153mg [Prunus persica] gb|EMJ03528.1| hypotheti |
JMSF001C24 | Sequence | 346 | 009482 (15) | ||||||||
JMSF001D24 | Sequence | 386 | 009482 (15) | 774 | 009482 (15) | ref|XP_007202329.1| | 3e-121 | hypothetical protein PRUPE_ppa009153mg [Prunus persica] gb|EMJ03528.1| hypotheti | |||
JMSF012L05 | Sequence | 556 | 009482 (15) | ref|XP_009797409.1| | 1e-31 | PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein 3 [Ni | 742 | 009482 (15) | ref|XP_007202329.1| | 2e-115 | hypothetical protein PRUPE_ppa009153mg [Prunus persica] gb|EMJ03528.1| hypotheti |
JMSF026C09 | Sequence | 703 | 009482 (15) | ref|XP_009797409.1| | 2e-69 | PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein 3 [Ni | 778 | 009482 (15) | ref|XP_007202329.1| | 2e-146 | hypothetical protein PRUPE_ppa009153mg [Prunus persica] gb|EMJ03528.1| hypotheti |
JMSF033G10 | Sequence | 647 | 009482 (15) | ref|XP_009797409.1| | 2e-122 | PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein 3 [Ni | 720 | 009482 (15) | ref|XP_007202329.1| | 1e-107 | hypothetical protein PRUPE_ppa009153mg [Prunus persica] gb|EMJ03528.1| hypotheti |
JMSF038P16 | Sequence | 685 | 009482 (15) | ref|XP_009627026.1| | 5e-54 | PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein 3 [Ni | 815 | 009482 (15) | ref|XP_009797409.1| | 6e-152 | PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein 3 [Ni |
JMSF053C09 | Sequence | 708 | 009482 (15) | ref|XP_009797409.1| | 4e-69 | PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein 3 [Ni | 931 | 009482 (15) | ref|XP_007202329.1| | 4e-142 | hypothetical protein PRUPE_ppa009153mg [Prunus persica] gb|EMJ03528.1| hypotheti |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig009482============================================1293 40 ------------------------------------------>JMSF012L05 <--------------------------------------------------------rJMSF012L05 62 ----------------------------->JMSF001D24 <---------------------------------------------------------rJMSF001D24 62 ----------------------------------------------------->JMSF053C09 <---------------------------------------------------------------------rJMSF053C09 85 ---------------------------------------------------->JMSF038P16 <--------------------------------------------------------------rJMSF038P16 115 -------------------------------------------->JMFF004H16 <------------------------------------------------------rJMFF004H16 155 ----------------------------------------------------->JMSF026C09 <----------------------------------------------------------rJMSF026C09 359 ------------------------------------------------->JMSF033G10 <-----------------------------------------------------rJMSF033G10
The following clones don't have the opposite end in this pair.
-------------------------->JMSF001C24-