clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF026C04 | Sequence | 555 | 000734 (12) | ref|XP_007965931.1| | 1e-48 | PREDICTED: histone H4 [Chlorocebus sabaeus] | 586 | 000734 (12) | ref|XP_007965931.1| | 2e-48 | PREDICTED: histone H4 [Chlorocebus sabaeus] |
JMFS116B12 | Sequence | 516 | 000734 (12) | gb|AFW80115.1| | 6e-49 | hypothetical protein ZEAMMB73_313798 [Zea mays] | |||||
JMSF012K22 | Sequence | 259 | 000734 (12) | ref|XP_007965931.1| | 2e-10 | PREDICTED: histone H4 [Chlorocebus sabaeus] | 584 | 000734 (12) | ref|XP_007965931.1| | 2e-48 | PREDICTED: histone H4 [Chlorocebus sabaeus] |
JMSF021L11 | Sequence | 633 | 000734 (12) | ref|XP_007965931.1| | 2e-47 | PREDICTED: histone H4 [Chlorocebus sabaeus] | 588 | 000734 (12) | ref|XP_007965931.1| | 1e-47 | PREDICTED: histone H4 [Chlorocebus sabaeus] |
JMSF022L11 | Sequence | 633 | 000734 (12) | ref|XP_007965931.1| | 2e-47 | PREDICTED: histone H4 [Chlorocebus sabaeus] | 588 | 000734 (12) | ref|XP_007965931.1| | 1e-47 | PREDICTED: histone H4 [Chlorocebus sabaeus] |
JMSF028J09 | Sequence | 629 | 000734 (12) | ref|XP_007965931.1| | 3e-48 | PREDICTED: histone H4 [Chlorocebus sabaeus] | 582 | 000734 (12) | ref|XP_007965931.1| | 2e-48 | PREDICTED: histone H4 [Chlorocebus sabaeus] |
JMSF047C23 | Sequence | 583 | 000734 (12) | ref|XP_007965931.1| | 2e-48 | PREDICTED: histone H4 [Chlorocebus sabaeus] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig000734============================================ 633 46 ------------------------------------------------------------------------------------------------->JMSF022L11 <--------------------------------------------------------------------------------------------rJMSF022L11 47 --------------------------------------------------------------------------------------->JMFF026C04 <--------------------------------------------------------------------------------------------rJMFF026C04 49 ---------------------------------------->JMSF012K22 <-------------------------------------------------------------------------------------------rJMSF012K22 55 --------------------------------------------------------------------------------------------------->JMSF021L11 <------------------------------------------------------------------------------------------rJMSF021L11 58 ------------------------------------------------------------------------------------------------->JMSF028J09 <------------------------------------------------------------------------------------------rJMSF028J09
The following clones don't have the opposite end in this pair.
--------------------------------------------------------------------------------->JMFS116B12- <-----------------------------------------------------------------------------------------rJMSF047C23-