clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF015H21 | Sequence | 549 | 012972 (10) | ref|XP_009803718.1| | 2e-57 | PREDICTED: phytoene dehydrogenase, chloroplastic/chromoplastic [Nicotiana sylve | 767 | 012972 (10) | ref|XP_011087837.1| | 4e-112 | PREDICTED: 15-cis-phytoene desaturase, chloroplastic/chromoplastic [Sesamum ind |
JMFF045E03 | Sequence | 548 | 012972 (10) | ref|XP_009803718.1| | 3e-53 | PREDICTED: phytoene dehydrogenase, chloroplastic/chromoplastic [Nicotiana sylve | 617 | 012972 (10) | ref|XP_009803718.1| | 2e-89 | PREDICTED: phytoene dehydrogenase, chloroplastic/chromoplastic [Nicotiana sylve |
JMSF044P15 | Sequence | 763 | 012972 (10) | ref|XP_009803718.1| | 1e-77 | PREDICTED: phytoene dehydrogenase, chloroplastic/chromoplastic [Nicotiana sylve | 644 | 012972 (10) | ref|XP_009803718.1| | 2e-103 | PREDICTED: phytoene dehydrogenase, chloroplastic/chromoplastic [Nicotiana sylve |
JMSF046J02 | Sequence | 756 | 012972 (10) | ref|XP_009803718.1| | 2e-72 | PREDICTED: phytoene dehydrogenase, chloroplastic/chromoplastic [Nicotiana sylve | 796 | 012972 (10) | ref|XP_009803718.1| | 1e-115 | PREDICTED: phytoene dehydrogenase, chloroplastic/chromoplastic [Nicotiana sylve |
JMSF051D10 | Sequence | 705 | 012972 (10) | ref|XP_009803718.1| | 5e-78 | PREDICTED: phytoene dehydrogenase, chloroplastic/chromoplastic [Nicotiana sylve | 766 | 012972 (10) | ref|XP_009803718.1| | 3e-116 | PREDICTED: phytoene dehydrogenase, chloroplastic/chromoplastic [Nicotiana sylve |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig012972============================================1596 1 --------------------------------->JMFF045E03 <--------------------------------------rJMFF045E03 57 ---------------------------------------------->JMSF046J02 <------------------------------------------------rJMSF046J02 62 --------------------------------->JMFF015H21 <-----------------------------------------------rJMFF015H21 82 ----------------------------------------------->JMSF044P15 <---------------------------------------rJMSF044P15 200 ------------------------------------------->JMSF051D10 <-----------------------------------------------rJMSF051D10
The following clones don't have the opposite end in this pair.