clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF005K23 | Sequence | 473 | 004311 (19) | ref|NP_001234585.1| | 2e-43 | chloroplast sedoheptulose-1,7-bisphosphatase [Solanum lycopersicum] gb|ACR46521. | 783 | 004311 (19) | ref|XP_011084948.1| | 3e-165 | PREDICTED: sedoheptulose-1,7-bisphosphatase, chloroplastic [Sesamum indicum] re |
JMFF007C24 | Sequence | 580 | 004311 (19) | ref|NP_001234585.1| | 3e-54 | chloroplast sedoheptulose-1,7-bisphosphatase [Solanum lycopersicum] gb|ACR46521. | 797 | 004311 (19) | ref|XP_011084948.1| | 2e-169 | PREDICTED: sedoheptulose-1,7-bisphosphatase, chloroplastic [Sesamum indicum] re |
JMFF034F11 | Sequence | 572 | 004311 (19) | ref|NP_001234585.1| | 4e-72 | chloroplast sedoheptulose-1,7-bisphosphatase [Solanum lycopersicum] gb|ACR46521. | 636 | 004311 (19) | ref|XP_006355654.1| | 2e-129 | PREDICTED: sedoheptulose-1,7-bisphosphatase, chloroplastic-like [Solanum tubero |
JMFS058B09 | Sequence | 621 | 004311 (19) | ref|NP_001234585.1| | 4e-87 | chloroplast sedoheptulose-1,7-bisphosphatase [Solanum lycopersicum] gb|ACR46521. | |||||
JMSF008E24 | Sequence | 355 | 004311 (19) | ref|XP_009590435.1| | 6e-25 | PREDICTED: sedoheptulose-1,7-bisphosphatase, chloroplastic [Nicotiana tomentosi | 742 | 004311 (19) | ref|XP_011084948.1| | 3e-162 | PREDICTED: sedoheptulose-1,7-bisphosphatase, chloroplastic [Sesamum indicum] re |
JMSF018O02 | Sequence | 529 | 004311 (19) | gb|EYU41251.1| | 2e-104 | hypothetical protein MIMGU_mgv1a007806mg [Erythranthe guttata] | |||||
JMSF024H03 | Sequence | 670 | 004311 (19) | ref|NP_001234585.1| | 5e-74 | chloroplast sedoheptulose-1,7-bisphosphatase [Solanum lycopersicum] gb|ACR46521. | 737 | 004311 (19) | ref|XP_006355654.1| | 1e-137 | PREDICTED: sedoheptulose-1,7-bisphosphatase, chloroplastic-like [Solanum tubero |
JMSF026C15 | Sequence | 674 | 004311 (19) | ref|NP_001234585.1| | 6e-97 | chloroplast sedoheptulose-1,7-bisphosphatase [Solanum lycopersicum] gb|ACR46521. | 777 | 004311 (19) | ref|XP_006355654.1| | 3e-175 | PREDICTED: sedoheptulose-1,7-bisphosphatase, chloroplastic-like [Solanum tubero |
JMSF033C11 | Sequence | 672 | 004311 (19) | ref|NP_001234585.1| | 8e-75 | chloroplast sedoheptulose-1,7-bisphosphatase [Solanum lycopersicum] gb|ACR46521. | 760 | 004311 (19) | ref|XP_011084948.1| | 4e-162 | PREDICTED: sedoheptulose-1,7-bisphosphatase, chloroplastic [Sesamum indicum] re |
JMSF042J05 | Sequence | 846 | 004311 (19) | ref|NP_001234585.1| | 5e-110 | chloroplast sedoheptulose-1,7-bisphosphatase [Solanum lycopersicum] gb|ACR46521. | 793 | 004311 (19) | ref|XP_006355654.1| | 3e-175 | PREDICTED: sedoheptulose-1,7-bisphosphatase, chloroplastic-like [Solanum tubero |
JMSF043J05 | Sequence | 152 | 004311 (19) | gb|KJB74208.1| | 2e-20 | hypothetical protein B456_011G279400 [Gossypium raimondii] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig004311============================================1440 1 ---------------------------------------------->JMSF033C11 <----------------------------------------------------rJMSF033C11 49 ---------------------------------------------->JMSF024H03 <------------------------------------------rJMSF024H03 90 --------------------------------------->JMFF034F11 <-------------------------------------------rJMFF034F11 93 ---------------------------------------------------------->JMSF042J05 <------------------------------------------------------rJMSF042J05 111 ---------------------------------------------->JMSF026C15 <-----------------------------------------------------rJMSF026C15 132 --------------------------------------->JMFF007C24 <--------------------------------------------------rJMFF007C24 132 -------------------------------->JMFF005K23 <-------------------------------------------------rJMFF005K23 141 ----------------------->JMSF008E24 <---------------------------------------------------rJMSF008E24
The following clones don't have the opposite end in this pair.
<----------rJMSF043J05- ------------------------------------------>JMFS058B09- <------------------------------------rJMSF018O02-