clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF033G21 | Sequence | 535 | 002627 (13) | ref|XP_006435966.1| | 1e-39 | hypothetical protein CICLE_v10033444mg, partial [Citrus clementina] gb|ESR49206. | 505 | 002627 (13) | ref|XP_006435966.1| | 8e-40 | hypothetical protein CICLE_v10033444mg, partial [Citrus clementina] gb|ESR49206. |
JMFF046D03 | Sequence | 534 | 002627 (13) | ref|XP_006435966.1| | 1e-39 | hypothetical protein CICLE_v10033444mg, partial [Citrus clementina] gb|ESR49206. | 417 | 002627 (13) | ref|XP_007011399.1| | 2e-11 | Cytochrome b-c1 complex subunit 8 [Theobroma cacao] gb|EOY20209.1| Cytochrome b- |
JMFN011G09 | Sequence | 507 | 002627 (13) | ref|XP_006435966.1| | 2e-39 | hypothetical protein CICLE_v10033444mg, partial [Citrus clementina] gb|ESR49206. | |||||
JMFN020I17 | Sequence | 547 | 002627 (13) | ref|XP_004242473.1| | 2e-38 | PREDICTED: cytochrome b-c1 complex subunit 8 [Solanum lycopersicum] | |||||
JMFN028L18 | Sequence | 504 | 002627 (13) | ref|XP_006435966.1| | 2e-39 | hypothetical protein CICLE_v10033444mg, partial [Citrus clementina] gb|ESR49206. | |||||
JMFN029B23 | Sequence | 586 | 002627 (13) | ref|XP_006435966.1| | 3e-39 | hypothetical protein CICLE_v10033444mg, partial [Citrus clementina] gb|ESR49206. | |||||
JMFN029F15 | Sequence | 429 | 002627 (13) | ref|XP_007011399.1| | 4e-09 | Cytochrome b-c1 complex subunit 8 [Theobroma cacao] gb|EOY20209.1| Cytochrome b- | |||||
JMFN034L13 | Sequence | 527 | 002627 (13) | ref|XP_006435966.1| | 2e-39 | hypothetical protein CICLE_v10033444mg, partial [Citrus clementina] gb|ESR49206. | |||||
JMFN035B11 | Sequence | 377 | 002627 (13) | ref|XP_010067635.1| | 9e-11 | PREDICTED: cytochrome b-c1 complex subunit 8 [Eucalyptus grandis] gb|KCW65810.1| | |||||
JMFN039G10 | Sequence | 507 | 002627 (13) | ref|XP_006435966.1| | 1e-39 | hypothetical protein CICLE_v10033444mg, partial [Citrus clementina] gb|ESR49206. | |||||
JMFS094D04 | Sequence | 390 | 002627 (13) | ref|XP_006435966.1| | 3e-40 | hypothetical protein CICLE_v10033444mg, partial [Citrus clementina] gb|ESR49206. |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig002627============================================ 599 53 ---------------------------------------------------------------------------------------->JMFF046D03 <--------------------------------------------------------------rJMFF046D03 95 ---------------------------------------------------------------------------------------->JMFF033G21 <-----------------------------------------------------------------------------------rJMFF033G21
The following clones don't have the opposite end in this pair.
---------------------------------------------------------------->JMFS094D04- <----------------------------------------------------------------------------------------JMFN029B23- ------------------------------------------------------------------------->JMFN034L13- <-----------------------------------------------------------------------JMFN029F15- ------------------------------------------------------------------------------------>JMFN039G10- ----------------------------------------------------------------------------------->JMFN028L18- ---------------------------------------------------------------------------------->JMFN011G09- <------------------------------------------------------------JMFN035B11- <-----------------------------------------------------------------------------------JMFN020I17-