List of clones in pair P015716.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010C24Sequence499002333 (14)ref|XP_004238931.1|6e-65PREDICTED: 50S ribosomal protein L15, chloroplastic [Solanum lycopersicum]651002333 (14)ref|XP_004238931.1|5e-74PREDICTED: 50S ribosomal protein L15, chloroplastic [Solanum lycopersicum]
JMFF046B16Sequence413002333 (14)ref|XP_006344133.1|2e-44PREDICTED: 50S ribosomal protein L15, chloroplastic-like [Solanum tuberosum]410002333 (14)gb|KJB31427.1|6e-20hypothetical protein B456_005G191400 [Gossypium raimondii]
JMFN018D24Sequence434002333 (14)gb|KDP29412.1|3e-48hypothetical protein JCGZ_18333 [Jatropha curcas]
JMFN036O19Sequence585002333 (14)ref|XP_006344133.1|8e-88PREDICTED: 50S ribosomal protein L15, chloroplastic-like [Solanum tuberosum]
JMSF032F04Sequence660002333 (14)ref|XP_006344133.1|2e-102PREDICTED: 50S ribosomal protein L15, chloroplastic-like [Solanum tuberosum]737002333 (14)ref|XP_004238931.1|2e-124PREDICTED: 50S ribosomal protein L15, chloroplastic [Solanum lycopersicum]
JMSF033E19Sequence645002333 (14)ref|XP_004238931.1|3e-97PREDICTED: 50S ribosomal protein L15, chloroplastic [Solanum lycopersicum]725002333 (14)ref|XP_004238931.1|3e-120PREDICTED: 50S ribosomal protein L15, chloroplastic [Solanum lycopersicum]
JMSF039G04Sequence661002333 (14)ref|XP_006344133.1|1e-101PREDICTED: 50S ribosomal protein L15, chloroplastic-like [Solanum tuberosum]818002333 (14)ref|XP_006344133.1|3e-128PREDICTED: 50S ribosomal protein L15, chloroplastic-like [Solanum tuberosum]
JMSF048A24Sequence666002333 (14)ref|XP_006344133.1|8e-101PREDICTED: 50S ribosomal protein L15, chloroplastic-like [Solanum tuberosum]733002333 (14)ref|XP_004238931.1|4e-120PREDICTED: 50S ribosomal protein L15, chloroplastic [Solanum lycopersicum]

Contig 2333 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig002333============================================1049         
  10  -------------------------------------->JMFF046B16                                                               
                                                                  <--------------------------------------rJMFF046B16  
 109 ------------------------------------------------------------>JMSF033E19                                          
                          <--------------------------------------------------------------------rJMSF033E19  
 114  ---------------------------------------------->JMFF010C24                                                       
                                 <------------------------------------------------------------rJMFF010C24  
 116  -------------------------------------------------------------->JMSF048A24                                       
                         <---------------------------------------------------------------------rJMSF048A24  
 156  -------------------------------------------------------------->JMSF032F04                                       
                      <--------------------------------------------------------------------rJMSF032F04  
 163  -------------------------------------------------------------->JMSF039G04                                       
               <--------------------------------------------------------------------------rJMSF039G04

The following clones don't have the opposite end in this pair.

       ------------------------------------------------------->JMFN036O19-                                            
                                                      ---------------------------------------->JMFN018D24-