clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF012J17 | Sequence | 587 | 008041 (10) | gb|AES80437.2| | 4e-73 | phosphoglycolate phosphatase-like protein [Medicago truncatula] | 725 | 008041 (10) | gb|KDO45307.1| | 4e-93 | hypothetical protein CISIN_1g016293mg [Citrus sinensis] |
JMFF023C04 | Sequence | 314 | 008041 (10) | gb|ACJ84739.1| | 1e-16 | unknown [Medicago truncatula] | 734 | 008041 (10) | gb|KDO45307.1| | 2e-99 | hypothetical protein CISIN_1g016293mg [Citrus sinensis] |
JMFN037M12 | Sequence | 615 | 008041 (10) | gb|KDO45307.1| | 2e-79 | hypothetical protein CISIN_1g016293mg [Citrus sinensis] | |||||
JMFN040I02 | Sequence | 549 | 008041 (10) | gb|EYU39740.1| | 1e-28 | hypothetical protein MIMGU_mgv1a008565mg [Erythranthe guttata] | |||||
JMSF044I24 | Sequence | 738 | 008041 (10) | ref|XP_003624218.1| | 3e-106 | Phosphoglycolate phosphatase [Medicago truncatula] gb|AES80436.1| phosphoglycola | 563 | 008041 (10) | ref|XP_009630369.1| | 5e-37 | PREDICTED: phosphoglycolate phosphatase 1B, chloroplastic-like [Nicotiana tomen |
JMSF051F20 | Sequence | 659 | 008041 (10) | gb|AES80437.2| | 1e-85 | phosphoglycolate phosphatase-like protein [Medicago truncatula] | 773 | 008041 (10) | gb|KDO45307.1| | 8e-110 | hypothetical protein CISIN_1g016293mg [Citrus sinensis] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig008041============================================1390 37 ----------------------------------------->JMFF012J17 <---------------------------------------------------rJMFF012J17 38 ---------------------------------------------------->JMSF044I24 <---------------------------------------rJMSF044I24 47 ---------------------------------------------->JMSF051F20 <-------------------------------------------------------rJMSF051F20 55 ---------------------->JMFF023C04 <----------------------------------------------------rJMFF023C04
The following clones don't have the opposite end in this pair.
------------------------------------------->JMFN037M12- ----------------------------------->JMFN040I02-