| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF008G05 | Sequence | 646 | 006748 (30) | gb|KJB39134.1| | 6e-104 | hypothetical protein B456_007G025200, partial [Gossypium raimondii] | 691 | 006748 (30) | gb|KJB39134.1| | 1e-103 | hypothetical protein B456_007G025200, partial [Gossypium raimondii] |
| JMFF023P09 | Sequence | 515 | 006748 (30) | ref|XP_011076034.1| | 1e-75 | PREDICTED: ubiquitin-conjugating enzyme E2 28-like [Sesamum indicum] ref|XP_0110 | |||||
| JMFF024A14 | Sequence | 506 | 006748 (30) | ref|NP_001274980.1| | 2e-90 | SUMO-conjugating enzyme UBC9-like [Solanum tuberosum] ref|XP_004234185.1| PREDIC | 638 | 006748 (30) | ref|XP_011076034.1| | 2e-103 | PREDICTED: ubiquitin-conjugating enzyme E2 28-like [Sesamum indicum] ref|XP_0110 |
| JMFN005K15 | Sequence | 622 | 006748 (30) | ref|XP_011076034.1| | 7e-104 | PREDICTED: ubiquitin-conjugating enzyme E2 28-like [Sesamum indicum] ref|XP_0110 | |||||
| JMFN006H11 | Sequence | 642 | 006748 (30) | ref|XP_008437368.1| | 6e-104 | PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa [Cucumis melo] | |||||
| JMFN009P05 | Sequence | 626 | 006748 (30) | gb|KJB39134.1| | 8e-104 | hypothetical protein B456_007G025200, partial [Gossypium raimondii] | |||||
| JMFN010B21 | Sequence | 626 | 006748 (30) | gb|KJB39134.1| | 8e-104 | hypothetical protein B456_007G025200, partial [Gossypium raimondii] | |||||
| JMFN020N21 | Sequence | 614 | 006748 (30) | gb|KJB39134.1| | 6e-104 | hypothetical protein B456_007G025200, partial [Gossypium raimondii] | |||||
| JMFN028I20 | Sequence | 652 | 006748 (30) | ref|XP_011076034.1| | 3e-103 | PREDICTED: ubiquitin-conjugating enzyme E2 28-like [Sesamum indicum] ref|XP_0110 | |||||
| JMFN031B16 | Sequence | 548 | 006748 (30) | ref|XP_011076034.1| | 9e-81 | PREDICTED: ubiquitin-conjugating enzyme E2 28-like [Sesamum indicum] ref|XP_0110 | |||||
| JMFN033J07 | Sequence | 625 | 006748 (30) | gb|KJB39134.1| | 9e-104 | hypothetical protein B456_007G025200, partial [Gossypium raimondii] | |||||
| JMFN033N16 | Sequence | 863 | 006748 (30) | ref|XP_007218529.1| | 6e-90 | hypothetical protein PRUPE_ppa012628mg [Prunus persica] gb|EMJ19728.1| hypotheti | |||||
| JMFN035K05 | Sequence | 624 | 006748 (30) | gb|KJB39134.1| | 7e-104 | hypothetical protein B456_007G025200, partial [Gossypium raimondii] | |||||
| JMFN038A17 | Sequence | 616 | 006748 (30) | gb|KJB39134.1| | 7e-104 | hypothetical protein B456_007G025200, partial [Gossypium raimondii] | |||||
| JMFN038I02 | Sequence | 637 | 006748 (30) | gb|KJB39134.1| | 9e-104 | hypothetical protein B456_007G025200, partial [Gossypium raimondii] | |||||
| JMFN040C18 | Sequence | 623 | 006748 (30) | gb|KJB39134.1| | 9e-104 | hypothetical protein B456_007G025200, partial [Gossypium raimondii] | |||||
| JMFN040F11 | Sequence | 622 | 006748 (30) | gb|KJB39134.1| | 8e-104 | hypothetical protein B456_007G025200, partial [Gossypium raimondii] | |||||
| JMFN044E07 | Sequence | 626 | 006748 (30) | gb|KJB39134.1| | 8e-104 | hypothetical protein B456_007G025200, partial [Gossypium raimondii] | |||||
| JMSF032B06 | Sequence | 646 | 006748 (30) | gb|KJB39134.1| | 6e-104 | hypothetical protein B456_007G025200, partial [Gossypium raimondii] | 673 | 006748 (30) | gb|KJB39134.1| | 8e-104 | hypothetical protein B456_007G025200, partial [Gossypium raimondii] |
| JMSF046M02 | Sequence | 723 | 006748 (30) | ref|XP_011076034.1| | 3e-103 | PREDICTED: ubiquitin-conjugating enzyme E2 28-like [Sesamum indicum] ref|XP_0110 | 675 | 006748 (30) | ref|XP_011076034.1| | 1e-103 | PREDICTED: ubiquitin-conjugating enzyme E2 28-like [Sesamum indicum] ref|XP_0110 |
| JMSF046M22 | Sequence | 646 | 006748 (30) | gb|KJB39134.1| | 6e-104 | hypothetical protein B456_007G025200, partial [Gossypium raimondii] | 650 | 006748 (30) | gb|KJB39134.1| | 1e-103 | hypothetical protein B456_007G025200, partial [Gossypium raimondii] |
| JMSF051D16 | Sequence | 649 | 006748 (30) | ref|XP_008437368.1| | 5e-104 | PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa [Cucumis melo] | 717 | 006748 (30) | ref|XP_008437368.1| | 1e-103 | PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa [Cucumis melo] |
| JMSF051E17 | Sequence | 648 | 006748 (30) | ref|XP_008437368.1| | 5e-104 | PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa [Cucumis melo] | 718 | 006748 (30) | ref|XP_008437368.1| | 1e-103 | PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa [Cucumis melo] |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig006748============================================ 892 174 ------------------------------------------------------------------------>JMSF051D16 <-------------------------------------------------------------------------------rJMSF051D16 174 ------------------------------------------------------------------------>JMSF051E17 <-------------------------------------------------------------------------------rJMSF051E17 195 -------------------------------------------------------->JMFF024A14 <----------------------------------------------------------------------rJMFF024A14 196 ------------------------------------------------------------------------>JMFF008G05 <----------------------------------------------------------------------------rJMFF008G05 216 ------------------------------------------------------------------------>JMSF032B06 <---------------------------------------------------------------------------rJMSF032B06 216 ------------------------------------------------------------------------>JMSF046M22 <------------------------------------------------------------------------rJMSF046M22 279 ------------------------------------------------------>JMSF046M02 <--------------------------------------------------------------------rJMSF046M02
The following clones don't have the opposite end in this pair.
<---------------------------------------------------------rJMFF023P09- ------------------------------------------------------------->JMFN031B16- ---------------------------------------------------------------------->JMFN035K05- ------------------------------------------------------------------------------------------------->JMFN033N16- ---------------------------------------------------------------------->JMFN040C18- ---------------------------------------------------------------------->JMFN009P05- --------------------------------------------------------------------->JMFN040F11- ------------------------------------------------------------------------>JMFN006H11- ---------------------------------------------------------------------->JMFN010B21- ---------------------------------------------------------------------->JMFN044E07- ------------------------------------------------------------------------>JMFN028I20- ---------------------------------------------------------------------->JMFN033J07- ----------------------------------------------------------------------->JMFN038I02- --------------------------------------------------------------------->JMFN020N21- --------------------------------------------------------------------->JMFN038A17- --------------------------------------------------------------------->JMFN005K15-