clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF014A16 | Sequence | 757 | 000121 (18) | ref|XP_011098728.1| | 5e-88 | PREDICTED: 40S ribosomal protein S19-1 [Sesamum indicum] | |||||
JMFF021C08 | Sequence | 582 | 000121 (18) | ref|XP_011098728.1| | 6e-89 | PREDICTED: 40S ribosomal protein S19-1 [Sesamum indicum] | 652 | 000121 (18) | ref|XP_011098728.1| | 2e-88 | PREDICTED: 40S ribosomal protein S19-1 [Sesamum indicum] |
JMFF022D04 | Sequence | 554 | 000121 (18) | ref|XP_011098728.1| | 4e-89 | PREDICTED: 40S ribosomal protein S19-1 [Sesamum indicum] | 681 | 000121 (18) | ref|XP_011098728.1| | 2e-88 | PREDICTED: 40S ribosomal protein S19-1 [Sesamum indicum] |
JMFF029D23 | Sequence | 549 | 000121 (18) | ref|XP_011098728.1| | 4e-89 | PREDICTED: 40S ribosomal protein S19-1 [Sesamum indicum] | 677 | 000121 (18) | ref|XP_011098728.1| | 7e-89 | PREDICTED: 40S ribosomal protein S19-1 [Sesamum indicum] |
JMFN006N10 | Sequence | 587 | 000121 (18) | gb|AFK42492.1| | 1e-76 | unknown [Lotus japonicus] | |||||
JMFN018N16 | Sequence | 614 | 000121 (18) | ref|XP_011098728.1| | 5e-89 | PREDICTED: 40S ribosomal protein S19-1 [Sesamum indicum] | |||||
JMFN025N03 | Sequence | 611 | 000121 (18) | gb|AFK42492.1| | 3e-84 | unknown [Lotus japonicus] | |||||
JMFN030H20 | Sequence | 648 | 000121 (18) | ref|XP_011098728.1| | 5e-89 | PREDICTED: 40S ribosomal protein S19-1 [Sesamum indicum] | |||||
JMFN031L10 | Sequence | 577 | 000121 (18) | ref|XP_011098728.1| | 2e-89 | PREDICTED: 40S ribosomal protein S19-1 [Sesamum indicum] | |||||
JMFN034A03 | Sequence | 573 | 000121 (18) | gb|AFK42492.1| | 8e-74 | unknown [Lotus japonicus] | |||||
JMSF043A05 | Sequence | 782 | 000121 (18) | ref|XP_011098728.1| | 2e-88 | PREDICTED: 40S ribosomal protein S19-1 [Sesamum indicum] | 678 | 000121 (18) | ref|XP_011098728.1| | 2e-88 | PREDICTED: 40S ribosomal protein S19-1 [Sesamum indicum] |
JMSF053E05 | Sequence | 691 | 000121 (18) | ref|XP_011098728.1| | 2e-88 | PREDICTED: 40S ribosomal protein S19-1 [Sesamum indicum] | 702 | 000121 (18) | ref|XP_011098728.1| | 3e-88 | PREDICTED: 40S ribosomal protein S19-1 [Sesamum indicum] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig000121============================================ 787 44 --------------------------------------------------------------------->JMFF022D04 <--------------------------------------------------------------------------------------rJMFF022D04 50 -------------------------------------------------------------------------------------------------->JMSF043A05 <-------------------------------------------------------------------------------------rJMSF043A05 73 ------------------------------------------------------------------------->JMFF021C08 <----------------------------------------------------------------------------------rJMFF021C08 86 --------------------------------------------------------------------------------------->JMSF053E05 <----------------------------------------------------------------------------------------rJMSF053E05 96 --------------------------------------------------------------------->JMFF029D23 <-------------------------------------------------------------------------------------rJMFF029D23
The following clones don't have the opposite end in this pair.
<----------------------------------------------------------------------------------------rJMSF016J01* ----------------------------------------------------------------------------->JMFN025N03- <-----------------------------------------------------------------------------------------------rJMFF014A16- ----------------------------------------------------------------------------->JMFN018N16- ------------------------------------------------------------------------>JMFN034A03- <--------------------------------------------------------------------------JMFN006N10- --------------------------------------------------------------------------------->JMFN030H20- ------------------------------------------------------------------------>JMFN031L10-