clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF018C15 | Sequence | 576 | 012194 (9) | ref|XP_007023076.1| | 1e-80 | Fatty acid hydroxylase 1 isoform 2 [Theobroma cacao] gb|EOY25698.1| Fatty acid h | 779 | 012194 (9) | ref|XP_010687074.1| | 2e-103 | PREDICTED: fatty acid 2-hydroxylase 1-like isoform X1 [Beta vulgaris subsp. vul |
JMFF035J06 | Sequence | 559 | 012194 (9) | ref|XP_007023076.1| | 4e-77 | Fatty acid hydroxylase 1 isoform 2 [Theobroma cacao] gb|EOY25698.1| Fatty acid h | 675 | 012194 (9) | ref|XP_009622087.1| | 4e-94 | PREDICTED: fatty acid 2-hydroxylase 1-like [Nicotiana tomentosiformis] |
JMFF043G16 | Sequence | 634 | 012194 (9) | ref|XP_006468341.1| | 2e-76 | PREDICTED: fatty acid 2-hydroxylase 1-like isoform X1 [Citrus sinensis] ref|XP_ | 590 | 012194 (9) | gb|KJB29862.1| | 2e-62 | hypothetical protein B456_005G121600 [Gossypium raimondii] |
JMFN019H14 | Sequence | 626 | 012194 (9) | ref|XP_007023076.1| | 3e-99 | Fatty acid hydroxylase 1 isoform 2 [Theobroma cacao] gb|EOY25698.1| Fatty acid h | |||||
JMSF050P20 | Sequence | 707 | 012194 (9) | ref|XP_007023076.1| | 3e-91 | Fatty acid hydroxylase 1 isoform 2 [Theobroma cacao] gb|EOY25698.1| Fatty acid h | 723 | 012194 (9) | ref|XP_010687074.1| | 5e-109 | PREDICTED: fatty acid 2-hydroxylase 1-like isoform X1 [Beta vulgaris subsp. vul |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig012194============================================1170 7 ----------------------------------------------------->JMFF043G16 <-------------------------------------------------rJMFF043G16 77 ----------------------------------------------------------->JMSF050P20 <-------------------------------------------------------------rJMSF050P20 123 ------------------------------------------------>JMFF018C15 <-----------------------------------------------------------------rJMFF018C15 140 ----------------------------------------------->JMFF035J06 <--------------------------------------------------------rJMFF035J06
The following clones don't have the opposite end in this pair.
----------------------------------------------------->JMFN019H14-