List of clones in pair P015580.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009G22Sequence551005968 (46)ref|XP_011099252.1|4e-102PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic [Sesamum indicum]756005968 (46)gb|AFH58000.1|2e-135chloroplast PsbO4 precursor [Nicotiana benthamiana]
JMFF011I24Sequence585005968 (46)ref|XP_011099252.1|8e-103PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic [Sesamum indicum]753005968 (46)ref|XP_009759927.1|4e-150PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic-like [Nicotiana sy
JMFF015N18Sequence544005968 (46)ref|XP_011099252.1|4e-102PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic [Sesamum indicum]302005968 (46)gb|AFH58000.1|1e-58chloroplast PsbO4 precursor [Nicotiana benthamiana]
JMFF017A11Sequence536005968 (46)ref|XP_011099252.1|4e-102PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic [Sesamum indicum]758005968 (46)ref|XP_009759927.1|1e-153PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic-like [Nicotiana sy
JMFF023E11Sequence504005968 (46)ref|XP_011099252.1|3e-82PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic [Sesamum indicum]447005968 (46)gb|AFH58000.1|1e-73chloroplast PsbO4 precursor [Nicotiana benthamiana]
JMFF024J09Sequence480005968 (46)ref|XP_011099252.1|4e-83PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic [Sesamum indicum]773005968 (46)ref|XP_009759927.1|1e-147PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic-like [Nicotiana sy
JMFF028A17Sequence518005968 (46)ref|XP_011099252.1|2e-87PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic [Sesamum indicum]643005968 (46)gb|AFH58000.1|9e-124chloroplast PsbO4 precursor [Nicotiana benthamiana]
JMFF030D16Sequence530005968 (46)ref|XP_011099252.1|3e-101PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic [Sesamum indicum]723005968 (46)gb|AFH58000.1|7e-140chloroplast PsbO4 precursor [Nicotiana benthamiana]
JMFF037N18Sequence556005968 (46)ref|XP_009759927.1|1e-120PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic-like [Nicotiana sy748005968 (46)ref|XP_009759927.1|1e-147PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic-like [Nicotiana sy
JMFF039P18Sequence534005968 (46)ref|XP_011099252.1|7e-90PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic [Sesamum indicum]313005968 (46)gb|AAR85969.1|8e-41ERT12 [Nicotiana tabacum]
JMFF040A15Sequence455005968 (46)ref|XP_011099252.1|4e-83PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic [Sesamum indicum]734005968 (46)ref|XP_009759927.1|8e-142PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic-like [Nicotiana sy
JMFF041M19Sequence609005968 (46)ref|XP_009759927.1|8e-122PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic-like [Nicotiana sy506005968 (46)gb|AFH58000.1|1e-82chloroplast PsbO4 precursor [Nicotiana benthamiana]
JMFF044K15Sequence631005968 (46)ref|XP_009759927.1|9e-127PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic-like [Nicotiana sy502005968 (46)gb|AFH58000.1|2e-81chloroplast PsbO4 precursor [Nicotiana benthamiana]
JMFF045L04Sequence585005968 (46)ref|XP_009759927.1|3e-116PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic-like [Nicotiana sy447005968 (46)gb|AFH58000.1|1e-60chloroplast PsbO4 precursor [Nicotiana benthamiana]
JMFF048P09Sequence434005968 (46)ref|XP_011099252.1|3e-65PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic [Sesamum indicum]439005968 (46)gb|AFH57997.1|3e-53chloroplast PsbO1 precursor [Nicotiana benthamiana]
JMFN012F09Sequence626005968 (46)ref|XP_009759927.1|2e-117PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic-like [Nicotiana sy
JMFN040E22Sequence628005968 (46)ref|XP_009759927.1|5e-118PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic-like [Nicotiana sy
JMFN040O02Sequence577005968 (46)gb|KDP31833.1|4e-77hypothetical protein JCGZ_12294 [Jatropha curcas]
JMFS076F01Sequence627005968 (46)ref|XP_009759927.1|2e-127PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic-like [Nicotiana sy
JMSF011I02Sequence365005968 (46)ref|XP_011099252.1|5e-58PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic [Sesamum indicum]775005968 (46)ref|XP_009759927.1|9e-163PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic-like [Nicotiana sy
JMSF013J22Sequence245005968 (46)ref|XP_011099252.1|8e-29PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic [Sesamum indicum]696005968 (46)ref|XP_009759927.1|2e-149PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic-like [Nicotiana sy
JMSF015M18Sequence461005968 (46)ref|XP_011099252.1|9e-84PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic [Sesamum indicum]801005968 (46)ref|XP_009759927.1|4e-170PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic-like [Nicotiana sy
JMSF019C10Sequence242005968 (46)ref|XP_011099252.1|3e-28PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic [Sesamum indicum]812005968 (46)ref|XP_009759927.1|3e-176PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic-like [Nicotiana sy
JMSF023F12Sequence195005968 (46)139005968 (46)
JMSF032N03Sequence703005968 (46)ref|XP_009759927.1|2e-141PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic-like [Nicotiana sy718005968 (46)ref|XP_009759927.1|2e-151PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic-like [Nicotiana sy

Contig 5968 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig005968============================================1240         
  18  ---------------------------------->JMFF048P09                                                                   
                                                                     <----------------------------------rJMFF048P09  
  58    -------------------------------------------->JMFF009G22                                                       
                                          <------------------------------------------------------------rJMFF009G22  
  80   -------------------------------------->JMFF024J09                                                              
                                      <-------------------------------------------------------------rJMFF024J09  
  96  ---------------------------------------------->JMFF011I24                                                       
                                      <-----------------------------------------------------------rJMFF011I24  
  97  ----------------------------------------->JMFF028A17                                                            
                                              <---------------------------------------------------rJMFF028A17  
  99  ------------------------------------------>JMFF039P18                                                           
                                                                        <------------------------rJMFF039P18  
 112 ---------------------------------------->JMFF023E11                                                              
                                                            <-----------------------------------rJMFF023E11  
 116     -------------------------------------------------->JMFF044K15                                                
                                                           <---------------------------------------rJMFF044K15  
 128      ------------------------------------------------>JMFF041M19                                                 
                                                           <----------------------------------------rJMFF041M19  
 137     ------------------------------------>JMFF040A15                                                              
                                        <---------------------------------------------------------rJMFF040A15  
 143       ---------------------------------------------->JMFF045L04                                                  
                                                                <-----------------------------------rJMFF045L04  
 151     ------------------------------------------->JMFF017A11                                                       
                                     <-----------------------------------------------------------rJMFF017A11  
 152     ------------------------------------------>JMFF030D16                                                        
                                       <---------------------------------------------------------rJMFF030D16  
 158     ----------------------------->JMSF011I02                                                                     
                                 <--------------------------------------------------------------rJMSF011I02  
 165    -------------------------------------------------------->JMSF032N03                                           
                                     <---------------------------------------------------------rJMSF032N03  
 171     ------------------------------------>JMSF015M18                                                              
                              <----------------------------------------------------------------rJMSF015M18  
 187     ------------------->JMSF013J22                                                                               
                                      <-------------------------------------------------------rJMSF013J22  
 190     ------------------->JMSF019C10                                                                               
                             <----------------------------------------------------------------rJMSF019C10  
 285    ------------------------------------------->JMFF015N18                                                        
                                                             <-----------------------rJMFF015N18  
 325                    -------------------------------------------->JMFF037N18                                       
                                      <-----------------------------------------------------------rJMFF037N18  
1103                                                                                      --------------->JMSF023F12   
                                                                                          <----------rJMSF023F12

The following clones don't have the opposite end in this pair.

       -------------------------------------------------->JMFN040E22-                                                 
          -------------------------------------------------->JMFS076F01-                                              
       -------------------------------------------------->JMFN012F09-                                                 
            ---------------------------------------------->JMFN040O02-