List of clones in pair P015440.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004I19Sequence455008246 (14)ref|XP_009589390.1|7e-71PREDICTED: charged multivesicular body protein 1-like [Nicotiana tomentosiformi693008246 (14)ref|XP_002281282.1|9e-119PREDICTED: charged multivesicular body protein 1b [Vitis vinifera] emb|CAN79153.
JMFF009P19Sequence540008246 (14)ref|XP_009791200.1|2e-67PREDICTED: charged multivesicular body protein 1-like [Nicotiana sylvestris]582008246 (14)ref|XP_002281282.1|3e-70PREDICTED: charged multivesicular body protein 1b [Vitis vinifera] emb|CAN79153.
JMFF014H03Sequence539008246 (14)ref|XP_009791200.1|2e-66PREDICTED: charged multivesicular body protein 1-like [Nicotiana sylvestris]393008246 (14)ref|XP_002281282.1|5e-37PREDICTED: charged multivesicular body protein 1b [Vitis vinifera] emb|CAN79153.
JMFF017A06Sequence490008246 (14)ref|XP_009589390.1|1e-78PREDICTED: charged multivesicular body protein 1-like [Nicotiana tomentosiformi789008246 (14)ref|XP_002281282.1|5e-87PREDICTED: charged multivesicular body protein 1b [Vitis vinifera] emb|CAN79153.
JMFF027P24Sequence435008246 (14)ref|XP_009589390.1|2e-65PREDICTED: charged multivesicular body protein 1-like [Nicotiana tomentosiformi757008246 (14)ref|XP_002281282.1|6e-118PREDICTED: charged multivesicular body protein 1b [Vitis vinifera] emb|CAN79153.
JMFF033M13Sequence532008246 (14)ref|XP_009589390.1|6e-64PREDICTED: charged multivesicular body protein 1-like [Nicotiana tomentosiformi791008246 (14)ref|XP_002281282.1|1e-114PREDICTED: charged multivesicular body protein 1b [Vitis vinifera] emb|CAN79153.
JMFN011K14Sequence611008246 (14)ref|XP_002281282.1|9e-117PREDICTED: charged multivesicular body protein 1b [Vitis vinifera] emb|CAN79153.
JMFS145A01Sequence613008246 (14)ref|XP_002281282.1|3e-116PREDICTED: charged multivesicular body protein 1b [Vitis vinifera] emb|CAN79153.

Contig 8246 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig008246============================================ 898         
  36     ----------------------------------------------------------->JMFF009P19                                       
                                        <----------------------------------------------------------------rJMFF009P19  
  47     ---------------------------------------------------------->JMFF033M13                                        
               <---------------------------------------------------------------------------------------rJMFF033M13  
  58     ------------------------------------------------------>JMFF017A06                                            
               <---------------------------------------------------------------------------------------rJMFF017A06  
 153     ----------------------------------------------------------->JMFF014H03                                       
                                                  <-----------------------------------------rJMFF014H03  
 163     -------------------------------------------------->JMFF004I19                                                
              <----------------------------------------------------------------------------rJMFF004I19  
 177     ------------------------------------------------>JMFF027P24                                                  
     <------------------------------------------------------------------------------------rJMFF027P24

The following clones don't have the opposite end in this pair.

             ------------------------------------------------------------------->JMFS145A01-                          
             ------------------------------------------------------------------->JMFN011K14-