| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF002D11 | Sequence | 537 | 004994 (17) | ref|XP_009594970.1| | 9e-47 | PREDICTED: 21 kDa protein-like [Nicotiana tomentosiformis] | 731 | 004994 (17) | emb|CBA10126.1| | 2e-67 | PME inhibitor [Nicotiana benthamiana] |
| JMFF003A16 | Sequence | 382 | 004994 (17) | emb|CDP05319.1| | 3e-20 | unnamed protein product [Coffea canephora] | 127 | 004994 (17) | |||
| JMFF028H10 | Sequence | 529 | 004994 (17) | ref|XP_009594970.1| | 5e-46 | PREDICTED: 21 kDa protein-like [Nicotiana tomentosiformis] | 752 | 004994 (17) | emb|CBA10126.1| | 3e-66 | PME inhibitor [Nicotiana benthamiana] |
| JMFN015M03 | Sequence | 501 | 004994 (17) | ref|XP_006362110.1| | 5e-40 | PREDICTED: 21 kDa protein-like isoform X1 [Solanum tuberosum] ref|XP_006367637.1 | |||||
| JMFS040F05 | Sequence | 624 | 004994 (17) | ref|XP_009594970.1| | 2e-67 | PREDICTED: 21 kDa protein-like [Nicotiana tomentosiformis] | |||||
| JMFS079C02 | Sequence | 641 | 004994 (17) | emb|CBA10126.1| | 4e-68 | PME inhibitor [Nicotiana benthamiana] | |||||
| JMSF010B21 | Sequence | 319 | 004994 (17) | gb|ABG47806.1| | 4e-17 | pectin methlyesterase inhibitor protein 1 [Capsicum annuum] gb|ABG81102.1| pecti | 761 | 004994 (17) | emb|CBA10126.1| | 5e-69 | PME inhibitor [Nicotiana benthamiana] |
| JMSF024N05 | Sequence | 687 | 004994 (17) | ref|XP_009594970.1| | 3e-55 | PREDICTED: 21 kDa protein-like [Nicotiana tomentosiformis] | 690 | 004994 (17) | ref|XP_009594970.1| | 4e-56 | PREDICTED: 21 kDa protein-like [Nicotiana tomentosiformis] |
| JMSF033N24 | Sequence | 593 | 004994 (17) | ref|XP_009594970.1| | 5e-56 | PREDICTED: 21 kDa protein-like [Nicotiana tomentosiformis] | 652 | 004994 (17) | emb|CBA10126.1| | 1e-68 | PME inhibitor [Nicotiana benthamiana] |
| JMSF043H04 | Sequence | 752 | 004994 (17) | emb|CBA10126.1| | 4e-69 | PME inhibitor [Nicotiana benthamiana] | |||||
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig004994============================================ 883 10 ----------------------------------------------------------->JMFF028H10 <-------------------------------------------------------------------------------------rJMFF028H10 17 ------------------------------------------------------------>JMFF002D11 <----------------------------------------------------------------------------------rJMFF002D11 41 ----------------------------------->JMSF010B21 <--------------------------------------------------------------------------------------rJMSF010B21 84 ------------------------------------------>JMFF003A16 <-------------rJMFF003A16 98 ----------------------------------------------------------------------------->JMSF024N05 <------------------------------------------------------------------------------rJMSF024N05 107 ------------------------------------------------------------------>JMSF033N24 <------------------------------------------------------------------------rJMSF033N24
The following clones don't have the opposite end in this pair.
------------------------------------------------------------------>JMSF035N12* ---------------------------------------------------------------------->JMFS040F05- ------------------------------------------------------------------------>JMFS079C02- -------------------------------------------------------->JMFN015M03- ------------------------------------------------------------------------------------>JMSF043H04-