clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF001N13 | Sequence | 582 | 003804 (13) | ref|XP_009760049.1| | 2e-72 | PREDICTED: gamma-interferon-inducible lysosomal thiol reductase-like isoform X3 | 651 | 003804 (13) | ref|XP_006344069.1| | 1e-65 | PREDICTED: GILT-like protein F37H8.5-like [Solanum tuberosum] |
JMFF017B08 | Sequence | 608 | 003804 (13) | ref|XP_009760049.1| | 3e-81 | PREDICTED: gamma-interferon-inducible lysosomal thiol reductase-like isoform X3 | |||||
JMFF029H19 | Sequence | 410 | 003804 (13) | ref|XP_009760046.1| | 201 | PREDICTED: GILT-like protein F37H8.5 isoform X1 [Nicotiana sylvestris] | 745 | 003804 (13) | ref|XP_002275283.1| | 1e-66 | PREDICTED: gamma-interferon-inducible lysosomal thiol reductase isoform X2 [Vit |
JMFF033P09 | Sequence | 737 | 003804 (13) | ref|XP_009760049.1| | 1e-79 | PREDICTED: gamma-interferon-inducible lysosomal thiol reductase-like isoform X3 | |||||
JMFF034B22 | Sequence | 516 | 003804 (13) | ref|XP_009760046.1| | 202 | PREDICTED: GILT-like protein F37H8.5 isoform X1 [Nicotiana sylvestris] | 738 | 003804 (13) | ref|XP_002275283.1| | 3e-89 | PREDICTED: gamma-interferon-inducible lysosomal thiol reductase isoform X2 [Vit |
JMFN008K13 | Sequence | 625 | 003804 (13) | emb|CAN76152.1| | 2e-70 | hypothetical protein VITISV_012674 [Vitis vinifera] | |||||
JMSF019H08 | Sequence | 239 | 003804 (13) | ref|XP_009760046.1| | 100 | PREDICTED: GILT-like protein F37H8.5 isoform X1 [Nicotiana sylvestris] | 736 | 003804 (13) | ref|XP_002275283.1| | 2e-88 | PREDICTED: gamma-interferon-inducible lysosomal thiol reductase isoform X2 [Vit |
JMSF038E22 | Sequence | 649 | 003804 (13) | ref|XP_009760049.1| | 1e-86 | PREDICTED: gamma-interferon-inducible lysosomal thiol reductase-like isoform X3 | 759 | 003804 (13) | ref|XP_002275283.1| | 1e-89 | PREDICTED: gamma-interferon-inducible lysosomal thiol reductase isoform X2 [Vit |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig003804============================================1009 32 --------------------------------------------------------------->JMSF038E22 <--------------------------------------------------------------------------rJMSF038E22 45 -------------------------------------------------->JMFF034B22 <------------------------------------------------------------------------rJMFF034B22 55 --------------------------------------------------------->JMFF001N13 <---------------------------------------------------------------rJMFF001N13 128 ---------------------------------------->JMFF029H19 <-------------------------------------------------------------------------rJMFF029H19 134 ----------------------->JMSF019H08 <------------------------------------------------------------------------rJMSF019H08
The following clones don't have the opposite end in this pair.
<------------------------------------------------------------------------rJMFF033P09- ----------------------------------------------------------->JMFF017B08- ------------------------------------------------------------->JMFN008K13-