List of clones in pair P015368.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002C20Sequence232004452 (69)gb|KEH40624.1|2e-1240S ribosomal protein S2-4 [Medicago truncatula]757004452 (69)ref|XP_011069984.1|5e-130PREDICTED: 40S ribosomal protein S2-4-like [Sesamum indicum]
JMFF003M15Sequence552004452 (69)emb|CDP18531.1|8e-89unnamed protein product [Coffea canephora]
JMFF009E17Sequence576004452 (69)emb|CDP18531.1|3e-97unnamed protein product [Coffea canephora]704004452 (69)ref|XP_011069984.1|1e-131PREDICTED: 40S ribosomal protein S2-4-like [Sesamum indicum]
JMFF010F01Sequence559004452 (69)emb|CDP18531.1|3e-92unnamed protein product [Coffea canephora]621004452 (69)ref|XP_011069984.1|1e-99PREDICTED: 40S ribosomal protein S2-4-like [Sesamum indicum]
JMFF010O22Sequence545004452 (69)ref|XP_009602518.1|3e-88PREDICTED: 40S ribosomal protein S2-3-like isoform X2 [Nicotiana tomentosiformi736004452 (69)ref|XP_011069984.1|9e-104PREDICTED: 40S ribosomal protein S2-4-like [Sesamum indicum]
JMFF011C01Sequence529004452 (69)ref|XP_009602518.1|2e-85PREDICTED: 40S ribosomal protein S2-3-like isoform X2 [Nicotiana tomentosiformi743004452 (69)ref|XP_011069984.1|3e-129PREDICTED: 40S ribosomal protein S2-4-like [Sesamum indicum]
JMFF011M02Sequence481004452 (69)ref|XP_009602518.1|7e-73PREDICTED: 40S ribosomal protein S2-3-like isoform X2 [Nicotiana tomentosiformi743004452 (69)ref|XP_011069984.1|2e-128PREDICTED: 40S ribosomal protein S2-4-like [Sesamum indicum]
JMFF015N01Sequence560004452 (69)emb|CDP18531.1|2e-93unnamed protein product [Coffea canephora]
JMFF017A24Sequence541004452 (69)emb|CDP18531.1|2e-87unnamed protein product [Coffea canephora]
JMFF019A13Sequence517004452 (69)emb|CDP18531.1|5e-82unnamed protein product [Coffea canephora]665004452 (69)ref|XP_011069984.1|2e-99PREDICTED: 40S ribosomal protein S2-4-like [Sesamum indicum]
JMFF019C18Sequence153004452 (69)
JMFF019D18Sequence558004452 (69)emb|CDP18531.1|6e-91unnamed protein product [Coffea canephora]771004452 (69)ref|XP_011069984.1|4e-132PREDICTED: 40S ribosomal protein S2-4-like [Sesamum indicum]
JMFF019P11Sequence515004452 (69)ref|XP_009602518.1|3e-82PREDICTED: 40S ribosomal protein S2-3-like isoform X2 [Nicotiana tomentosiformi669004452 (69)ref|XP_011069984.1|2e-99PREDICTED: 40S ribosomal protein S2-4-like [Sesamum indicum]
JMFF023B05Sequence524004452 (69)ref|XP_009602518.1|6e-83PREDICTED: 40S ribosomal protein S2-3-like isoform X2 [Nicotiana tomentosiformi529004452 (69)ref|XP_011069984.1|2e-80PREDICTED: 40S ribosomal protein S2-4-like [Sesamum indicum]
JMFF023L13Sequence518004452 (69)ref|XP_009602518.1|3e-82PREDICTED: 40S ribosomal protein S2-3-like isoform X2 [Nicotiana tomentosiformi739004452 (69)ref|XP_011069984.1|4e-124PREDICTED: 40S ribosomal protein S2-4-like [Sesamum indicum]
JMFF024E11Sequence500004452 (69)ref|XP_009794389.1|3e-76PREDICTED: 40S ribosomal protein S2-3, partial [Nicotiana sylvestris]693004452 (69)ref|XP_011069984.1|1e-95PREDICTED: 40S ribosomal protein S2-4-like [Sesamum indicum]
JMFF026B05Sequence558004452 (69)emb|CDP18531.1|2e-92unnamed protein product [Coffea canephora]663004452 (69)ref|XP_011069984.1|7e-100PREDICTED: 40S ribosomal protein S2-4-like [Sesamum indicum]
JMFF027I02Sequence551004452 (69)emb|CDP18531.1|6e-91unnamed protein product [Coffea canephora]751004452 (69)ref|XP_011069984.1|1e-91PREDICTED: 40S ribosomal protein S2-4-like [Sesamum indicum]
JMFF027I08Sequence561004452 (69)emb|CDP18531.1|2e-93unnamed protein product [Coffea canephora]753004452 (69)ref|XP_011069984.1|4e-122PREDICTED: 40S ribosomal protein S2-4-like [Sesamum indicum]
JMFF028M02Sequence136004452 (69)656004452 (69)ref|XP_011069984.1|7e-100PREDICTED: 40S ribosomal protein S2-4-like [Sesamum indicum]
JMFF029N21Sequence514004452 (69)ref|XP_010057233.1|3e-69PREDICTED: 40S ribosomal protein S2-4 [Eucalyptus grandis] gb|KCW90197.1| hypoth737004452 (69)ref|XP_011069984.1|9e-120PREDICTED: 40S ribosomal protein S2-4-like [Sesamum indicum]
JMFF033I08Sequence518004452 (69)ref|XP_009602518.1|6e-83PREDICTED: 40S ribosomal protein S2-3-like isoform X2 [Nicotiana tomentosiformi780004452 (69)ref|XP_011069984.1|3e-128PREDICTED: 40S ribosomal protein S2-4-like [Sesamum indicum]
JMFF036P12Sequence571004452 (69)emb|CDP18531.1|8e-101unnamed protein product [Coffea canephora]
JMFF038D22Sequence555004452 (69)emb|CDP18531.1|6e-92unnamed protein product [Coffea canephora]762004452 (69)ref|XP_011069984.1|2e-111PREDICTED: 40S ribosomal protein S2-4-like [Sesamum indicum]
JMFF040J02Sequence463004452 (69)gb|AFW90641.1|2e-6740S ribosomal protein S2 [Solanum tuberosum]702004452 (69)ref|XP_011069984.1|2e-122PREDICTED: 40S ribosomal protein S2-4-like [Sesamum indicum]
JMFF041L05Sequence626004452 (69)emb|CDP18531.1|1e-108unnamed protein product [Coffea canephora]603004452 (69)ref|XP_011069984.1|1e-94PREDICTED: 40S ribosomal protein S2-4-like [Sesamum indicum]
JMFF045J05Sequence627004452 (69)emb|CDP18531.1|1e-107unnamed protein product [Coffea canephora]584004452 (69)ref|XP_011069984.1|2e-84PREDICTED: 40S ribosomal protein S2-4-like [Sesamum indicum]
JMFF045P17Sequence636004452 (69)emb|CDP18531.1|4e-111unnamed protein product [Coffea canephora]583004452 (69)ref|XP_011069984.1|4e-79PREDICTED: 40S ribosomal protein S2-4-like [Sesamum indicum]
JMFF046J04Sequence436004452 (69)gb|AFW90641.1|3e-5840S ribosomal protein S2 [Solanum tuberosum]341004452 (69)ref|XP_011069984.1|1e-13PREDICTED: 40S ribosomal protein S2-4-like [Sesamum indicum]
JMFN032O14Sequence611004452 (69)emb|CDP18531.1|5e-112unnamed protein product [Coffea canephora]
JMFS065C01Sequence616004452 (69)emb|CDP18531.1|1e-102unnamed protein product [Coffea canephora]
JMSF020I24Sequence722004452 (69)ref|XP_009777712.1|8e-134PREDICTED: 40S ribosomal protein S2-3-like [Nicotiana sylvestris]770004452 (69)ref|XP_004168599.1|1e-143PREDICTED: 40S ribosomal protein S2-3-like [Cucumis sativus] gb|KGN59397.1| hypo
JMSF024H04Sequence682004452 (69)emb|CDP18531.1|2e-123unnamed protein product [Coffea canephora]723004452 (69)ref|XP_008443195.1|9e-140PREDICTED: 40S ribosomal protein S2-3-like [Cucumis melo] gb|ADN33986.1| 40S rib
JMSF029N02Sequence651004452 (69)emb|CDP18531.1|1e-94unnamed protein product [Coffea canephora]626004452 (69)ref|XP_006431702.1|1e-63hypothetical protein CICLE_v10003471mg [Citrus clementina] gb|ESR44942.1| hypoth
JMSF030F08Sequence656004452 (69)emb|CDP18531.1|3e-117unnamed protein product [Coffea canephora]774004452 (69)ref|XP_011069984.1|3e-121PREDICTED: 40S ribosomal protein S2-4-like [Sesamum indicum]
JMSF045J11Sequence787004452 (69)ref|XP_010057233.1|6e-149PREDICTED: 40S ribosomal protein S2-4 [Eucalyptus grandis] gb|KCW90197.1| hypoth751004452 (69)ref|XP_004168599.1|8e-144PREDICTED: 40S ribosomal protein S2-3-like [Cucumis sativus] gb|KGN59397.1| hypo
JMSF046J11Sequence759004452 (69)ref|XP_009777712.1|1e-133PREDICTED: 40S ribosomal protein S2-3-like [Nicotiana sylvestris]729004452 (69)ref|XP_011069984.1|5e-137PREDICTED: 40S ribosomal protein S2-4-like [Sesamum indicum]

Contig 4452 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig004452============================================1152         
  12  ----------------------------------------------->JMFF027I02                                                      
                                        <----------------------------------------------------------------rJMFF027I02  
 125  -------------------------------------------->JMFF019A13                                                         
                                     <---------------------------------------------------------rJMFF019A13  
 127  -------------------------------------------->JMFF019P11                                                         
                                     <---------------------------------------------------------rJMFF019P11  
 127  -------------------------------------------->JMFF033I08                                                         
                           <-------------------------------------------------------------------rJMFF033I08  
 129  ------------------------------------------------>JMFF026B05                                                     
                                     <---------------------------------------------------------rJMFF026B05  
 132  ----------->JMFF028M02                                                                                          
                                     <--------------------------------------------------------rJMFF028M02  
 132  ------------------------------------------------>JMFF027I08                                                     
                             <----------------------------------------------------------------rJMFF027I08  
 140  -------------------------------------------------------->JMSF030F08                                             
                          <-------------------------------------------------------------------rJMSF030F08  
 141  ----------------------------------------------->JMFF010O22                                                      
                             <---------------------------------------------------------------rJMFF010O22  
 141  ------------------------------------------------------->JMFF045P17                                              
                                            <------------------------------------------------rJMFF045P17  
 143  ------------------------------------------------>JMFF019D18                                                     
                          <------------------------------------------------------------------rJMFF019D18  
 148  ------------------------------------------------>JMFF038D22                                                     
                           <-----------------------------------------------------------------rJMFF038D22  
 149  ------------------------------------------------------>JMFF045J05                                               
                                          <--------------------------------------------------rJMFF045J05  
 153  -------------------------------------------->JMFF023L13                                                         
                             <---------------------------------------------------------------rJMFF023L13  
 163  ------------------->JMFF002C20                                                                                  
                          <----------------------------------------------------------------rJMFF002C20  
 167  ----------------------------------------->JMFF011M02                                                            
                           <----------------------------------------------------------------rJMFF011M02  
 167  ------------------------------------------------>JMFF010F01                                                     
                                     <-----------------------------------------------------rJMFF010F01  
 169  ------------------------------------------------------>JMFF041L05                                               
                                       <----------------------------------------------------rJMFF041L05  
 170  --------------------------------------------->JMFF011C01                                                        
                           <----------------------------------------------------------------rJMFF011C01  
 173  -------------------------------------------------------->JMSF029N02                                             
                                     <-----------------------------------------------------rJMSF029N02  
 177  ---------------------------------------->JMFF040J02                                                             
                             <------------------------------------------------------------rJMFF040J02  
 192  --------------------------------------------->JMFF023B05                                                        
                                           <--------------------------------------------rJMFF023B05  
 195  -------------------------------------------------------------->JMSF020I24                                       
                      <------------------------------------------------------------------rJMSF020I24  
 207  -------------------------------------------->JMFF029N21                                                         
                        <---------------------------------------------------------------rJMFF029N21  
 212  -------------------------------------------------->JMFF009E17                                                   
                          <-------------------------------------------------------------rJMFF009E17  
 214          ----------------------------->JMFF046J04                                                                
                                                                   <---------------------------rJMFF046J04  
 216  ----------------------------------------------------------------->JMSF046J11                                    
                        <--------------------------------------------------------------rJMSF046J11  
 216  -------------------------------------------------------------------->JMSF045J11                                 
                     <-----------------------------------------------------------------rJMSF045J11  
 232  ----------------------------------------------------------->JMSF024H04                                          
                       <-------------------------------------------------------------rJMSF024H04  
 411                       ------------------------------->JMFF024E11                                                 
                               <-----------------------------------------------------------rJMFF024E11

The following clones don't have the opposite end in this pair.

                                                                         <------------rJMFF019C18-                    
                                                          <------------------------------rJMSF006B09*                 
        ------------------------------------------------->JMFF036P12-                                                 
                                                            <-----------------------------rJMSF006D11#                
              -------------------------------------------->JMFS065C01-                                                
     ----------------------------------------------->JMFF003M15-                                                      
      ---------------------------------------------->JMFF017A24-                                                      
      ------------------------------------------------>JMFF015N01-                                                    
        ----------------------------------------------------->JMFN032O14-