clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF005F01 | Sequence | 472 | 008050 (13) | emb|CDP02151.1| | 4e-10 | unnamed protein product [Coffea canephora] | 600 | 008050 (13) | ref|XP_009608096.1| | 3e-26 | PREDICTED: gibberellin-regulated protein 14-like [Nicotiana tomentosiformis] |
JMFN013O14 | Sequence | 627 | 008050 (13) | emb|CDP02151.1| | 3e-27 | unnamed protein product [Coffea canephora] | |||||
JMFN018G03 | Sequence | 641 | 008050 (13) | emb|CDP02151.1| | 4e-27 | unnamed protein product [Coffea canephora] | |||||
JMFN020C13 | Sequence | 534 | 008050 (13) | emb|CDP02151.1| | 2e-27 | unnamed protein product [Coffea canephora] | |||||
JMFN030J04 | Sequence | 622 | 008050 (13) | emb|CDP02151.1| | 3e-27 | unnamed protein product [Coffea canephora] | |||||
JMFN032D09 | Sequence | 614 | 008050 (13) | emb|CDP02151.1| | 2e-27 | unnamed protein product [Coffea canephora] | |||||
JMFN033D21 | Sequence | 634 | 008050 (13) | emb|CDP02151.1| | 2e-27 | unnamed protein product [Coffea canephora] | |||||
JMFN033P22 | Sequence | 640 | 008050 (13) | emb|CDP02151.1| | 2e-27 | unnamed protein product [Coffea canephora] | |||||
JMFN035E10 | Sequence | 628 | 008050 (13) | emb|CDP02151.1| | 2e-27 | unnamed protein product [Coffea canephora] | |||||
JMFN042O21 | Sequence | 625 | 008050 (13) | emb|CDP02151.1| | 3e-27 | unnamed protein product [Coffea canephora] | |||||
JMSF045L03 | Sequence | 707 | 008050 (13) | emb|CDP02151.1| | 7e-27 | unnamed protein product [Coffea canephora] | 574 | 008050 (13) | emb|CDP02151.1| | 4e-27 | unnamed protein product [Coffea canephora] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig008050============================================ 707 35 ------------------------------------------------------------------>JMFF005F01 <----------------------------------------------------------------------------------rJMFF005F01 50 --------------------------------------------------------------------------------------------------->JMSF045L03 <--------------------------------------------------------------------------------rJMSF045L03
The following clones don't have the opposite end in this pair.
----------------------------------------------------------------------------------------->JMFN033D21- ---------------------------------------------------------------------------------------->JMFN035E10- --------------------------------------------------------------------------------------->JMFN042O21- ------------------------------------------------------------------------>JMFN020C13- -------------------------------------------------------------------------------------->JMFN030J04- -------------------------------------------------------------------------------------->JMFN032D09- ---------------------------------------------------------------------------------------->JMFN013O14- ------------------------------------------------------------------------------------------>JMFN018G03- ----------------------------------------------------------------------------------------->JMFN033P22-