List of clones in pair P015252.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF023K04Sequence450001239 (29)ref|XP_011071315.1|3e-42PREDICTED: PGR5-like protein 1A, chloroplastic [Sesamum indicum]
JMFF050D10Sequence583001239 (29)ref|XP_006358383.1|6e-60PREDICTED: PGR5-like protein 1A, chloroplastic-like [Solanum tuberosum]450001239 (29)ref|XP_011071315.1|1e-37PREDICTED: PGR5-like protein 1A, chloroplastic [Sesamum indicum]
JMSF002N02Sequence356001239 (29)ref|XP_006358383.1|2e-15PREDICTED: PGR5-like protein 1A, chloroplastic-like [Solanum tuberosum]749001239 (29)ref|XP_011071315.1|2e-114PREDICTED: PGR5-like protein 1A, chloroplastic [Sesamum indicum]
JMSF004C24Sequence390001239 (29)ref|XP_006358383.1|1e-27PREDICTED: PGR5-like protein 1A, chloroplastic-like [Solanum tuberosum]
JMSF010K05Sequence405001239 (29)ref|XP_006358383.1|1e-27PREDICTED: PGR5-like protein 1A, chloroplastic-like [Solanum tuberosum]785001239 (29)ref|XP_011071315.1|9e-122PREDICTED: PGR5-like protein 1A, chloroplastic [Sesamum indicum]
JMSF011J16Sequence330001239 (29)770001239 (29)ref|XP_011071315.1|2e-120PREDICTED: PGR5-like protein 1A, chloroplastic [Sesamum indicum]
JMSF018O03Sequence425001239 (29)ref|XP_006358383.1|2e-27PREDICTED: PGR5-like protein 1A, chloroplastic-like [Solanum tuberosum]746001239 (29)ref|XP_011071315.1|5e-116PREDICTED: PGR5-like protein 1A, chloroplastic [Sesamum indicum]
JMSF024F19Sequence649001239 (29)ref|XP_006358383.1|1e-65PREDICTED: PGR5-like protein 1A, chloroplastic-like [Solanum tuberosum]620001239 (29)ref|XP_011071315.1|7e-60PREDICTED: PGR5-like protein 1A, chloroplastic [Sesamum indicum]
JMSF033G22Sequence712001239 (29)ref|XP_006358383.1|1e-88PREDICTED: PGR5-like protein 1A, chloroplastic-like [Solanum tuberosum]747001239 (29)ref|XP_011071315.1|5e-116PREDICTED: PGR5-like protein 1A, chloroplastic [Sesamum indicum]
JMSF040N01Sequence670001239 (29)ref|XP_006358383.1|2e-64PREDICTED: PGR5-like protein 1A, chloroplastic-like [Solanum tuberosum]940001239 (29)ref|XP_011071315.1|1e-160PREDICTED: PGR5-like protein 1A, chloroplastic [Sesamum indicum]
JMSF042I22Sequence762001239 (29)ref|XP_006358383.1|1e-109PREDICTED: PGR5-like protein 1A, chloroplastic-like [Solanum tuberosum]738001239 (29)ref|XP_011071315.1|4e-104PREDICTED: PGR5-like protein 1A, chloroplastic [Sesamum indicum]
JMSF044I02Sequence642001239 (29)ref|XP_006358383.1|3e-75PREDICTED: PGR5-like protein 1A, chloroplastic-like [Solanum tuberosum]874001239 (29)ref|XP_011071315.1|3e-144PREDICTED: PGR5-like protein 1A, chloroplastic [Sesamum indicum]
JMSF045C06Sequence776001239 (29)ref|XP_004244596.1|4e-80PREDICTED: PGR5-like protein 1B, chloroplastic [Solanum lycopersicum]758001239 (29)ref|XP_011071315.1|2e-96PREDICTED: PGR5-like protein 1A, chloroplastic [Sesamum indicum]
JMSF046M17Sequence725001239 (29)ref|XP_004245668.1|9e-78PREDICTED: PGR5-like protein 1A, chloroplastic [Solanum lycopersicum]609001239 (29)ref|XP_011071315.1|6e-60PREDICTED: PGR5-like protein 1A, chloroplastic [Sesamum indicum]
JMSF052O24Sequence620001239 (29)ref|XP_006358383.1|2e-68PREDICTED: PGR5-like protein 1A, chloroplastic-like [Solanum tuberosum]804001239 (29)ref|XP_011071315.1|3e-131PREDICTED: PGR5-like protein 1A, chloroplastic [Sesamum indicum]

Contig 1239 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig001239============================================1401         
  44 ----------------------->JMSF011J16                                                                               
                                               <------------------------------------------------------rJMSF011J16  
  81   ----------------------------------------------->JMSF040N01                                                     
                                   <------------------------------------------------------------------rJMSF040N01  
 106      --------------------------------------------->JMSF024F19                                                    
                                                                  <-----------------------------------rJMSF024F19  
 125          ---------------------------------------->JMFF050D10                                                     
                                                                         <-------------------------------rJMFF050D10  
 163          ----------------------------->JMSF018O03                                                                
                                                <-----------------------------------------------------rJMSF018O03  
 163         -------------------------------------------------->JMSF033G22                                            
                                                <-----------------------------------------------------rJMSF033G22  
 164         ----------------------------------------------->JMSF046M17                                               
                                                                  <-----------------------------------rJMSF046M17  
 175           ------------------------------------------->JMSF052O24                                                 
                                            <---------------------------------------------------------rJMSF052O24  
 177           ------------------------>JMSF002N02                                                                    
                                                 <----------------------------------------------------rJMSF002N02  
 184           ---------------------------->JMSF010K05                                                                
                                              <-------------------------------------------------------rJMSF010K05  
 186          ------------------------------------------------------->JMSF045C06                                      
                                                <----------------------------------------------------rJMSF045C06  
 195           -------------------------------------------->JMSF044I02                                                
                                        <------------------------------------------------------------rJMSF044I02  
 220             ----------------------------------------------------->JMSF042I22                                     
                                                <----------------------------------------------------rJMSF042I22

The following clones don't have the opposite end in this pair.

                                                                                        <---------rJMSF004A22*        
                --------------------------->JMSF004C24-                                                               
                                                                     <------------------------------rJMFF023K04-