| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF023M21 | Sequence | 481 | 008621 (20) | dbj|BAA90760.1| | 5e-74 | non-photosynthetic ferredoxin [Ipomoea nil] | 673 | 008621 (20) | dbj|BAA90760.1| | 1e-86 | non-photosynthetic ferredoxin [Ipomoea nil] |
| JMFF026A17 | Sequence | 558 | 008621 (20) | dbj|BAA90760.1| | 3e-87 | non-photosynthetic ferredoxin [Ipomoea nil] | 639 | 008621 (20) | dbj|BAA90760.1| | 7e-87 | non-photosynthetic ferredoxin [Ipomoea nil] |
| JMFF032K19 | Sequence | 504 | 008621 (20) | dbj|BAA90760.1| | 5e-75 | non-photosynthetic ferredoxin [Ipomoea nil] | 596 | 008621 (20) | dbj|BAA90760.1| | 4e-87 | non-photosynthetic ferredoxin [Ipomoea nil] |
| JMFF033K24 | Sequence | 570 | 008621 (20) | dbj|BAA90760.1| | 3e-87 | non-photosynthetic ferredoxin [Ipomoea nil] | 372 | 008621 (20) | ref|XP_009592968.1| | 4e-50 | PREDICTED: ferredoxin, root R-B1-like [Nicotiana tomentosiformis] ref|XP_0095929 |
| JMFF037M11 | Sequence | 519 | 008621 (20) | dbj|BAA90760.1| | 6e-75 | non-photosynthetic ferredoxin [Ipomoea nil] | 684 | 008621 (20) | dbj|BAA90760.1| | 1e-86 | non-photosynthetic ferredoxin [Ipomoea nil] |
| JMFN010J10 | Sequence | 606 | 008621 (20) | dbj|BAA90760.1| | 5e-87 | non-photosynthetic ferredoxin [Ipomoea nil] | |||||
| JMFN010J12 | Sequence | 606 | 008621 (20) | dbj|BAA90760.1| | 5e-87 | non-photosynthetic ferredoxin [Ipomoea nil] | |||||
| JMFN014P03 | Sequence | 591 | 008621 (20) | dbj|BAA90760.1| | 3e-74 | non-photosynthetic ferredoxin [Ipomoea nil] | |||||
| JMFN015H15 | Sequence | 618 | 008621 (20) | dbj|BAA90760.1| | 5e-87 | non-photosynthetic ferredoxin [Ipomoea nil] | |||||
| JMFN030A21 | Sequence | 610 | 008621 (20) | dbj|BAA90760.1| | 5e-87 | non-photosynthetic ferredoxin [Ipomoea nil] | |||||
| JMFN033N12 | Sequence | 636 | 008621 (20) | dbj|BAA90760.1| | 7e-87 | non-photosynthetic ferredoxin [Ipomoea nil] | |||||
| JMFN037L08 | Sequence | 249 | 008621 (20) | dbj|BAA90760.1| | 2e-10 | non-photosynthetic ferredoxin [Ipomoea nil] | |||||
| JMFN043F14 | Sequence | 573 | 008621 (20) | dbj|BAA90760.1| | 6e-69 | non-photosynthetic ferredoxin [Ipomoea nil] | |||||
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig008621============================================1009 347 ----------------------------------------------->JMFF023M21 <-----------------------------------------------------------------rJMFF023M21 348 ------------------------------------------------->JMFF032K19 <----------------------------------------------------------rJMFF032K19 370 ------------------------------------------------------>JMFF026A17 <--------------------------------------------------------------rJMFF026A17 381 -------------------------------------------------------->JMFF033K24 <------------------------------------rJMFF033K24 430 ---------------------------------------->JMFF037M11 <--------------------------------------------------------rJMFF037M11
The following clones don't have the opposite end in this pair.
<--------------------------------------------------------rJMSF037I05# ------------------------------------------------------------>JMFN030A21- ----------------------------------------------------------->JMFN010J12- ------------------------------------------------------------>JMFN015H15- ------------------------>JMFN037L08- ------------------------------------------------------------->JMFN033N12- ---------------------------------------------------------->JMFN014P03- <--------------------------------------------------------JMFN043F14- ----------------------------------------------------------->JMFN010J10- ---------------------------------------------------------------->rJMSF041J03#