List of clones in pair P015208.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011P23Sequence541009433 (36)sp|P40619.1|HMGL_IPONI3e-59RecName: Full=HMG1/2-like protein [Ipomoea nil]724009433 (36)sp|P40619.1|HMGL_IPONI3e-58RecName: Full=HMG1/2-like protein [Ipomoea nil]
JMFF019F06Sequence490009433 (36)sp|P40619.1|HMGL_IPONI5e-49RecName: Full=HMG1/2-like protein [Ipomoea nil]741009433 (36)sp|P40619.1|HMGL_IPONI7e-53RecName: Full=HMG1/2-like protein [Ipomoea nil]
JMFF041J21Sequence644009433 (36)sp|P40619.1|HMGL_IPONI3e-50RecName: Full=HMG1/2-like protein [Ipomoea nil]639009433 (36)sp|P40619.1|HMGL_IPONI4e-49RecName: Full=HMG1/2-like protein [Ipomoea nil]
JMFN003E03Sequence617009433 (36)sp|P40619.1|HMGL_IPONI1e-53RecName: Full=HMG1/2-like protein [Ipomoea nil]
JMFN004K10Sequence630009433 (36)sp|P40619.1|HMGL_IPONI2e-53RecName: Full=HMG1/2-like protein [Ipomoea nil]
JMFN004N24Sequence614009433 (36)sp|P40619.1|HMGL_IPONI2e-53RecName: Full=HMG1/2-like protein [Ipomoea nil]
JMFN010E07Sequence634009433 (36)sp|P40619.1|HMGL_IPONI2e-53RecName: Full=HMG1/2-like protein [Ipomoea nil]
JMFN013B03Sequence622009433 (36)sp|P40619.1|HMGL_IPONI2e-53RecName: Full=HMG1/2-like protein [Ipomoea nil]
JMFN014F24Sequence624009433 (36)sp|P40619.1|HMGL_IPONI2e-53RecName: Full=HMG1/2-like protein [Ipomoea nil]
JMFN014J10Sequence669009433 (36)sp|P40619.1|HMGL_IPONI3e-53RecName: Full=HMG1/2-like protein [Ipomoea nil]
JMFN018H12Sequence615009433 (36)sp|P40619.1|HMGL_IPONI2e-53RecName: Full=HMG1/2-like protein [Ipomoea nil]
JMFN032B18Sequence620009433 (36)sp|P40619.1|HMGL_IPONI2e-53RecName: Full=HMG1/2-like protein [Ipomoea nil]
JMFN039M04Sequence634009433 (36)sp|P40619.1|HMGL_IPONI2e-53RecName: Full=HMG1/2-like protein [Ipomoea nil]
JMFN040K24Sequence612009433 (36)sp|P40619.1|HMGL_IPONI2e-53RecName: Full=HMG1/2-like protein [Ipomoea nil]
JMFS115B02Sequence495009433 (36)sp|P40619.1|HMGL_IPONI5e-29RecName: Full=HMG1/2-like protein [Ipomoea nil]
JMFS117G10Sequence591009433 (36)sp|P40619.1|HMGL_IPONI1e-53RecName: Full=HMG1/2-like protein [Ipomoea nil]
JMSF003E19Sequence381009433 (36)sp|P40619.1|HMGL_IPONI1e-34RecName: Full=HMG1/2-like protein [Ipomoea nil]699009433 (36)sp|P40619.1|HMGL_IPONI4e-53RecName: Full=HMG1/2-like protein [Ipomoea nil]
JMSF009E06Sequence414009433 (36)sp|P40619.1|HMGL_IPONI3e-49RecName: Full=HMG1/2-like protein [Ipomoea nil]753009433 (36)sp|P40619.1|HMGL_IPONI7e-53RecName: Full=HMG1/2-like protein [Ipomoea nil]
JMSF020N07Sequence674009433 (36)sp|P40619.1|HMGL_IPONI3e-53RecName: Full=HMG1/2-like protein [Ipomoea nil]728009433 (36)sp|P40619.1|HMGL_IPONI6e-53RecName: Full=HMG1/2-like protein [Ipomoea nil]
JMSF033A24Sequence637009433 (36)sp|P40619.1|HMGL_IPONI2e-53RecName: Full=HMG1/2-like protein [Ipomoea nil]723009433 (36)sp|P40619.1|HMGL_IPONI5e-53RecName: Full=HMG1/2-like protein [Ipomoea nil]
JMSF038L14Sequence685009433 (36)sp|P40619.1|HMGL_IPONI4e-53RecName: Full=HMG1/2-like protein [Ipomoea nil]722009433 (36)sp|P40619.1|HMGL_IPONI5e-53RecName: Full=HMG1/2-like protein [Ipomoea nil]
JMSF038N01Sequence676009433 (36)sp|P40619.1|HMGL_IPONI3e-53RecName: Full=HMG1/2-like protein [Ipomoea nil]737009433 (36)sp|P40619.1|HMGL_IPONI6e-53RecName: Full=HMG1/2-like protein [Ipomoea nil]
JMSF040D04Sequence581009433 (36)sp|P40619.1|HMGL_IPONI1e-53RecName: Full=HMG1/2-like protein [Ipomoea nil]797009433 (36)sp|P40619.1|HMGL_IPONI1e-52RecName: Full=HMG1/2-like protein [Ipomoea nil]
JMSF045I09Sequence769009433 (36)sp|P40619.1|HMGL_IPONI9e-53RecName: Full=HMG1/2-like protein [Ipomoea nil]699009433 (36)sp|P40619.1|HMGL_IPONI4e-53RecName: Full=HMG1/2-like protein [Ipomoea nil]

Contig 9433 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig009433============================================ 903         
  89       ---------------------------------------------------------------->JMSF040D04                                
             <----------------------------------------------------------------------------------------rJMSF040D04  
  94           --------------------------------------------->JMSF009E06                                               
                     <-----------------------------------------------------------------------------------rJMSF009E06  
 101 -------------------------------------------------------------------------->JMSF020N07                            
             <--------------------------------------------------------------------------------rJMSF020N07  
 102 ---------------------------------------------------------------------->JMSF033A24                                
             <--------------------------------------------------------------------------------rJMSF033A24  
 177       --------------------------------------------------------------------------->JMSF038L14                     
           <-------------------------------------------------------------------------------rJMSF038L14  
 177       ------------------------------------------------------------------------------------->JMSF045I09           
             <-----------------------------------------------------------------------------rJMSF045I09  
 178       ----------------------------------------->JMSF003E19                                                       
             <-----------------------------------------------------------------------------rJMSF003E19  
 179           ----------------------------------------------------------->JMFF011P23                                 
                <-------------------------------------------------------------------------------rJMFF011P23  
 183            ----------------------------------------------------------------------->JMFF041J21                    
                        <----------------------------------------------------------------------rJMFF041J21  
 261                   --------------------------------------------------------------->JMSF038N01                     
                       <----------------------------------------------------------------------rJMSF038N01  
 321                           ------------------------------>JMFF019F06                                              
             <----------------------------------------------------------------------------------rJMFF019F06

The following clones don't have the opposite end in this pair.

                                           ------------------------------------------------------>JMFS115B02-         
                      -------------------------------------------------------------------->JMFN004K10-                
                    -------------------------------------------------------------------------->JMFN014J10-            
             ---------------------------------------------------------------------->JMFN039M04-                       
            --------------------------------------------------------------------->JMFN014F24-                         
                                         <-------------------------------------------------rJMSF034A24*               
                  -------------------------------------------------------------------->JMFN018H12-                    
                 ------------------------------------------------------------------->JMFN004N24-                      
                  ------------------------------------------------------------------->JMFN040K24-                     
                  -------------------------------------------------------------------->JMFN003E03-                    
                  ----------------------------------------------------------------->JMFS117G10-                       
                 -------------------------------------------------------------------->JMFN013B03-                     
                 ---------------------------------------------------------------------->JMFN010E07-                   
             -------------------------------------------------------------------->JMFN032B18-