clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF002A09 | Sequence | 383 | 001019 (29) | ref|XP_003551292.2| | 1e-48 | PREDICTED: histone H4-like [Glycine max] | 550 | 001019 (29) | ref|XP_003551292.2| | 3e-51 | PREDICTED: histone H4-like [Glycine max] |
JMFF002A10 | Sequence | 159 | 001019 (29) | ref|XP_008359709.1| | 57.4 | PREDICTED: LOW QUALITY PROTEIN: histone H4-like [Malus domestica] | |||||
JMFF003C08 | Sequence | 573 | 001019 (29) | ref|XP_003551292.2| | 2e-50 | PREDICTED: histone H4-like [Glycine max] | 582 | 001019 (29) | ref|XP_003551292.2| | 2e-50 | PREDICTED: histone H4-like [Glycine max] |
JMFF011A04 | Sequence | 602 | 001019 (29) | ref|XP_003551292.2| | 5e-51 | PREDICTED: histone H4-like [Glycine max] | 601 | 001019 (29) | ref|XP_003551292.2| | 5e-51 | PREDICTED: histone H4-like [Glycine max] |
JMFF018F23 | Sequence | 515 | 001019 (29) | ref|XP_003551292.2| | 1e-50 | PREDICTED: histone H4-like [Glycine max] | 556 | 001019 (29) | ref|XP_003551292.2| | 2e-50 | PREDICTED: histone H4-like [Glycine max] |
JMFF024J12 | Sequence | 418 | 001019 (29) | gb|EMD41847.1| | 5e-35 | hypothetical protein CERSUDRAFT_147209, partial [Ceriporiopsis subvermispora B] | |||||
JMFF025D04 | Sequence | 608 | 001019 (29) | ref|XP_003551292.2| | 6e-51 | PREDICTED: histone H4-like [Glycine max] | 550 | 001019 (29) | ref|XP_003551292.2| | 3e-51 | PREDICTED: histone H4-like [Glycine max] |
JMFF030B21 | Sequence | 388 | 001019 (29) | ref|XP_003551292.2| | 2e-50 | PREDICTED: histone H4-like [Glycine max] | 550 | 001019 (29) | ref|XP_003551292.2| | 3e-51 | PREDICTED: histone H4-like [Glycine max] |
JMFF039G10 | Sequence | 550 | 001019 (29) | ref|XP_003551292.2| | 3e-51 | PREDICTED: histone H4-like [Glycine max] | |||||
JMFN004I13 | Sequence | 560 | 001019 (29) | gb|EMT31824.1| | 3e-49 | Histone H4 [Aegilops tauschii] | |||||
JMFN009I04 | Sequence | 527 | 001019 (29) | ref|XP_003551292.2| | 1e-49 | PREDICTED: histone H4-like [Glycine max] | |||||
JMFN012F18 | Sequence | 556 | 001019 (29) | ref|XP_003551292.2| | 8e-50 | PREDICTED: histone H4-like [Glycine max] | |||||
JMFN019A24 | Sequence | 597 | 001019 (29) | ref|XP_003551292.2| | 8e-50 | PREDICTED: histone H4-like [Glycine max] | |||||
JMFN032G07 | Sequence | 547 | 001019 (29) | ref|XP_003551292.2| | 3e-50 | PREDICTED: histone H4-like [Glycine max] | |||||
JMFN034L10 | Sequence | 585 | 001019 (29) | ref|XP_003551292.2| | 4e-50 | PREDICTED: histone H4-like [Glycine max] | |||||
JMFN037K23 | Sequence | 599 | 001019 (29) | ref|XP_003551292.2| | 1e-49 | PREDICTED: histone H4-like [Glycine max] | |||||
JMFN041N21 | Sequence | 540 | 001019 (29) | ref|XP_003551292.2| | 7e-50 | PREDICTED: histone H4-like [Glycine max] | |||||
JMFS013D05 | Sequence | 575 | 001019 (29) | ref|XP_003551292.2| | 1e-49 | PREDICTED: histone H4-like [Glycine max] | |||||
JMFS019B09 | Sequence | 487 | 001019 (29) | gb|AFW80115.1| | 4e-49 | hypothetical protein ZEAMMB73_313798 [Zea mays] | |||||
JMFS019D05 | Sequence | 503 | 001019 (29) | gb|ACG30677.1| | 9e-52 | histone H4 [Zea mays] | |||||
JMFS149H10 | Sequence | 513 | 001019 (29) | ref|XP_003551292.2| | 5e-50 | PREDICTED: histone H4-like [Glycine max] | |||||
JMFS155D12 | Sequence | 529 | 001019 (29) | gb|EMT31824.1| | 4e-49 | Histone H4 [Aegilops tauschii] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig001019============================================ 624 26 ------------------------------------------------------------------------------------------------>JMFF011A04 <-----------------------------------------------------------------------------------------------rJMFF011A04 55 ------------------------------------------------------------------------------------------->JMFF003C08 <------------------------------------------------------------------------------------------rJMFF003C08 66 ---------------------------------------------------------------------------------->JMFF018F23 <----------------------------------------------------------------------------------------rJMFF018F23 72 ------------------------------------------------------------>JMFF002A09 <---------------------------------------------------------------------------------------rJMFF002A09 72 ------------------------------------------------------------->JMFF030B21 <---------------------------------------------------------------------------------------rJMFF030B21 72 ------------------------------------------------------------------------------------------------>JMFF025D04 <---------------------------------------------------------------------------------------rJMFF025D04
The following clones don't have the opposite end in this pair.
----------------------------------------------------------------------------------------->JMFN004I13- ---------------------------------------------------------------------------------->JMFS149H10- -------------------------------------------------------------------------------------->JMFN041N21- ----------------------------------------------------------------------------------------------->JMFN037K23- --------------------------------------------------------------------------------------->JMFN032G07- <-----------------------------------------------------------------rJMFF024J12- ------------------------------------------------------------------------------------------->JMFS013D05- <---------------------------------------------------------------------------------------rJMFF039G10- --------------------------------------------------------------------------------------------->JMFN034L10- ----------------------------------------------------------------------------------------------->JMFN019A24- ------------------------------------------------------------------------------------>JMFS155D12- <----------------------------------------------------------------------rJMSF040J04* ----------------------------------------------------------------------------->JMFS019B09- <-------------------------rJMFF002A10- -------------------------------------------------------------------------------->JMFS019D05- ---------------------------------------------------------------------------------------->JMFN012F18- ------------------------------------------------------------------------------------>JMFN009I04-