clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF009K12 | Sequence | 156 | 010293 (19) | ||||||||
JMFF019L13 | Sequence | 517 | 010293 (19) | emb|CAA96528.1| | 3e-67 | G protein beta-subunit-like protein [Nicotiana plumbaginifolia] | 735 | 010293 (19) | ref|XP_006365404.1| | 3e-114 | PREDICTED: guanine nucleotide-binding protein subunit beta-like protein-like [S |
JMFF022C09 | Sequence | 529 | 010293 (19) | emb|CAA96528.1| | 5e-89 | G protein beta-subunit-like protein [Nicotiana plumbaginifolia] | 624 | 010293 (19) | ref|XP_009780116.1| | 1e-94 | PREDICTED: guanine nucleotide-binding protein subunit beta-like protein [Nicoti |
JMFF022F16 | Sequence | 512 | 010293 (19) | emb|CAA96528.1| | 4e-89 | G protein beta-subunit-like protein [Nicotiana plumbaginifolia] | 742 | 010293 (19) | ref|XP_006365404.1| | 3e-118 | PREDICTED: guanine nucleotide-binding protein subunit beta-like protein-like [S |
JMFF028A10 | Sequence | 600 | 010293 (19) | emb|CAA96528.1| | 2e-89 | G protein beta-subunit-like protein [Nicotiana plumbaginifolia] | |||||
JMFF041O22 | Sequence | 633 | 010293 (19) | emb|CAA96528.1| | 9e-116 | G protein beta-subunit-like protein [Nicotiana plumbaginifolia] | 618 | 010293 (19) | ref|XP_009780116.1| | 4e-86 | PREDICTED: guanine nucleotide-binding protein subunit beta-like protein [Nicoti |
JMFF048E19 | Sequence | 357 | 010293 (19) | ref|XP_009776114.1| | 2e-42 | PREDICTED: guanine nucleotide-binding protein subunit beta-like protein [Nicoti | 438 | 010293 (19) | ref|XP_011084467.1| | 1e-38 | PREDICTED: LOW QUALITY PROTEIN: guanine nucleotide-binding protein subunit beta |
JMFF051B16 | Sequence | 489 | 010293 (19) | emb|CAA96528.1| | 4e-63 | G protein beta-subunit-like protein [Nicotiana plumbaginifolia] | 610 | 010293 (19) | ref|XP_011084467.1| | 3e-25 | PREDICTED: LOW QUALITY PROTEIN: guanine nucleotide-binding protein subunit beta |
JMFN003M18 | Sequence | 627 | 010293 (19) | emb|CAA96528.1| | 3e-121 | G protein beta-subunit-like protein [Nicotiana plumbaginifolia] | |||||
JMSF017P19 | Sequence | 245 | 010293 (19) | gb|AAN86757.1| | 3e-18 | G-protein beta-subunit/auxin-regulated protein [Nicotiana tabacum] | 743 | 010293 (19) | ref|XP_006365404.1| | 2e-127 | PREDICTED: guanine nucleotide-binding protein subunit beta-like protein-like [S |
JMSF037M13 | Sequence | 694 | 010293 (19) | ref|XP_004252271.1| | 2e-127 | PREDICTED: guanine nucleotide-binding protein subunit beta-like protein isoform | 627 | 010293 (19) | ref|XP_009780116.1| | 4e-95 | PREDICTED: guanine nucleotide-binding protein subunit beta-like protein [Nicoti |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig010293============================================1247 8 ---------------------------------------->JMFF022F16 <-----------------------------------------------------------rJMFF022F16 15 ----------------------------------------->JMFF019L13 <---------------------------------------------------------rJMFF019L13 96 ----------------------------------->JMFF022C09 <-------------------------------------------------rJMFF022C09 103 ------------------------------------------------>JMSF037M13 <-------------------------------------------------rJMSF037M13 119 ------------>JMSF017P19 <-----------------------------------------------------------rJMSF017P19 174 -------------------------------------------------->JMFF041O22 <----------------------------------rJMFF041O22 181 -------------------------------------->JMFF051B16 <-----------------rJMFF051B16 187 ---------------------------->JMFF048E19 <-------------------rJMFF048E19
The following clones don't have the opposite end in this pair.
-------------------------------------------------->JMFN003M18- <-----------rJMFF009K12- ----------------------------------------------->JMFF028A10-