List of clones in pair P015134.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005K01Sequence518002167 (43)ref|XP_002519950.1|2e-58chlorophyll A/B binding protein, putative [Ricinus communis] gb|EEF42554.1| chlo754002167 (43)ref|XP_010252321.1|2e-139PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic [Nelumbo nucifer
JMFF014J21Sequence528002167 (43)ref|XP_002519950.1|2e-60chlorophyll A/B binding protein, putative [Ricinus communis] gb|EEF42554.1| chlo740002167 (43)emb|CAA43590.1|2e-101Type I (26 kD) CP29 polypeptide [Solanum lycopersicum]
JMFF019D13Sequence562002167 (43)ref|XP_002519950.1|1e-67chlorophyll A/B binding protein, putative [Ricinus communis] gb|EEF42554.1| chlo744002167 (43)ref|XP_004241877.1|4e-93PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic [Solanum lycoper
JMFF027L18Sequence499002167 (43)ref|XP_002519950.1|5e-52chlorophyll A/B binding protein, putative [Ricinus communis] gb|EEF42554.1| chlo727002167 (43)ref|XP_004241877.1|5e-124PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic [Solanum lycoper
JMFF031O09Sequence587002167 (43)ref|XP_006441834.1|5e-75hypothetical protein CICLE_v10021452mg [Citrus clementina] gb|ESR55074.1| hypoth741002167 (43)ref|XP_010252321.1|1e-136PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic [Nelumbo nucifer
JMFF036K08Sequence530002167 (43)ref|XP_002519950.1|2e-58chlorophyll A/B binding protein, putative [Ricinus communis] gb|EEF42554.1| chlo661002167 (43)emb|CAA43590.1|2e-109Type I (26 kD) CP29 polypeptide [Solanum lycopersicum]
JMFF045D13Sequence580002167 (43)ref|XP_006441836.1|1e-45hypothetical protein CICLE_v10021452mg [Citrus clementina] gb|ESR55076.1| hypoth471002167 (43)gb|EYU22686.1|2e-32hypothetical protein MIMGU_mgv1a011290mg [Erythranthe guttata]
JMFF048O13Sequence513002167 (43)ref|XP_002519950.1|2e-56chlorophyll A/B binding protein, putative [Ricinus communis] gb|EEF42554.1| chlo295002167 (43)ref|XP_004241877.1|7e-24PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic [Solanum lycoper
JMFN001H03Sequence504002167 (43)ref|XP_002519950.1|6e-53chlorophyll A/B binding protein, putative [Ricinus communis] gb|EEF42554.1| chlo
JMFN003C08Sequence497002167 (43)gb|EYU22686.1|3e-70hypothetical protein MIMGU_mgv1a011290mg [Erythranthe guttata]
JMFN003G10Sequence627002167 (43)ref|XP_006441834.1|7e-78hypothetical protein CICLE_v10021452mg [Citrus clementina] gb|ESR55074.1| hypoth
JMFN005N07Sequence626002167 (43)emb|CAA43590.1|7e-112Type I (26 kD) CP29 polypeptide [Solanum lycopersicum]
JMFN007H01Sequence611002167 (43)gb|KCW70992.1|3e-81hypothetical protein EUGRSUZ_F04099 [Eucalyptus grandis]
JMFN007P17Sequence595002167 (43)gb|KDO42919.1|2e-76hypothetical protein CISIN_1g0225291mg, partial [Citrus sinensis]
JMFN012N03Sequence503002167 (43)gb|EYU22686.1|8e-61hypothetical protein MIMGU_mgv1a011290mg [Erythranthe guttata]
JMFN015L19Sequence495002167 (43)gb|ACX71300.1|2e-58chloroplast pigment-binding protein CP26 [Capsicum annuum]
JMFN019C20Sequence641002167 (43)ref|XP_006441834.1|7e-79hypothetical protein CICLE_v10021452mg [Citrus clementina] gb|ESR55074.1| hypoth
JMFN030J17Sequence599002167 (43)ref|XP_002519950.1|2e-68chlorophyll A/B binding protein, putative [Ricinus communis] gb|EEF42554.1| chlo
JMFN036E05Sequence625002167 (43)emb|CAA43590.1|8e-113Type I (26 kD) CP29 polypeptide [Solanum lycopersicum]
JMFN043A18Sequence595002167 (43)emb|CAA43590.1|6e-112Type I (26 kD) CP29 polypeptide [Solanum lycopersicum]
JMSF010O03Sequence304002167 (43)gb|AAL32041.1|AF439282_15e-06chl a/b-binding protein [Retama raetam]719002167 (43)ref|XP_010252321.1|7e-127PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic [Nelumbo nucifer
JMSF015F23Sequence391002167 (43)ref|XP_002519950.1|1e-24chlorophyll A/B binding protein, putative [Ricinus communis] gb|EEF42554.1| chlo746002167 (43)ref|XP_004241877.1|1e-142PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic [Solanum lycoper
JMSF022I15Sequence117002167 (43)
JMSF031A09Sequence679002167 (43)ref|XP_004241877.1|8e-83PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic [Solanum lycoper706002167 (43)ref|XP_010252321.1|4e-138PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic [Nelumbo nucifer
JMSF032O10Sequence673002167 (43)gb|KCW70992.1|4e-82hypothetical protein EUGRSUZ_F04099 [Eucalyptus grandis]715002167 (43)ref|XP_010252321.1|2e-125PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic [Nelumbo nucifer
JMSF039G13Sequence669002167 (43)gb|KCW70992.1|2e-81hypothetical protein EUGRSUZ_F04099 [Eucalyptus grandis]890002167 (43)ref|XP_010252321.1|7e-141PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic [Nelumbo nucifer
JMSF043N12Sequence732002167 (43)ref|XP_009404293.1|7e-95PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like isoform X2 721002167 (43)ref|XP_010252321.1|1e-127PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic [Nelumbo nucifer

Contig 2167 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig002167============================================1114         
   2 ----------------------------------------------->JMFF014J21                                                       
                                        <----------------------------------------------------------------rJMFF014J21  
  33 ------------------------------------------------------------>JMSF039G13                                          
                      <-------------------------------------------------------------------------------rJMSF039G13  
  47  ---------------------------------------------->JMFF048O13                                                       
                                                                           <--------------------------rJMFF048O13  
  54 --------------------------------------------->JMFF027L18                                                         
                                  <-----------------------------------------------------------------rJMFF027L18  
  54 -------------------------------------------------->JMFF019D13                                                    
                                 <------------------------------------------------------------------rJMFF019D13  
  58  --------------------------------------------------->JMFF045D13                                                  
                                                          <------------------------------------------rJMFF045D13  
  72 ------------------------------------------------------------------>JMSF043N12                                    
                                 <-----------------------------------------------------------------rJMSF043N12  
  81  --------------------------->JMSF010O03                                                                          
                                 <----------------------------------------------------------------rJMSF010O03  
  85 ------------------------------------------------------------>JMSF032O10                                          
                                  <---------------------------------------------------------------rJMSF032O10  
  94 ---------------------------------------------->JMFF005K01                                                        
                            <-------------------------------------------------------------------rJMFF005K01  
  94 ----------------------------------------------------->JMFF031O09                                                 
                              <------------------------------------------------------------------rJMFF031O09  
  97 ----------------------------------------------->JMFF036K08                                                       
                                     <-----------------------------------------------------------rJMFF036K08  
 137 ----------------------------------->JMSF015F23                                                                   
                         <-------------------------------------------------------------------rJMSF015F23  
 139 ------------------------------------------------------------->JMSF031A09                                         
                              <--------------------------------------------------------------rJMSF031A09

The following clones don't have the opposite end in this pair.

       ------------------------------------------------------>JMFN007P17-                                             
                                                         -------------------------------------------->JMFN015L19-     
                                                         --------------------------------------------->JMFN012N03-    
     --------------------------------------------------------->JMSF051M02*                                            
                                       -------------------------------------------------->JMFN043A18-                 
                                                     -------------------------------------------->JMFN003C08-         
     --------------------------------------------->JMFN001H03-                                                        
       ---------------------------------------------------------->JMFN019C20-                                         
           ------------------------------------------------------->JMFN007H01-                                        
     ------------------>JMSF004B18*                                                                                   
      ------------------------------------------------------>JMFN030J17-                                              
                                                                                        --------->JMSF022I15-         
                                       ----------------------------------------------------->JMFN005N07-              
                                       -------------------------------------------------->JMFN036E05-                 
       -------------------------------------------------------->JMFN003G10-