List of clones in pair P015129.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001B11Sequence625005461 (28)ref|XP_010488596.1|3e-94PREDICTED: 60S ribosomal protein L13a-2 [Camelina sativa]
JMFF006N06Sequence606005461 (28)ref|XP_009789164.1|2e-92PREDICTED: 60S ribosomal protein L13a-1 [Nicotiana sylvestris]818005461 (28)emb|CDP03876.1|6e-101unnamed protein product [Coffea canephora]
JMFF008B16Sequence532005461 (28)ref|XP_009622553.1|1e-110PREDICTED: 60S ribosomal protein L13a-4-like [Nicotiana tomentosiformis]714005461 (28)ref|XP_010488596.1|3e-82PREDICTED: 60S ribosomal protein L13a-2 [Camelina sativa]
JMFF012F22Sequence539005461 (28)ref|XP_009622553.1|3e-111PREDICTED: 60S ribosomal protein L13a-4-like [Nicotiana tomentosiformis]834005461 (28)ref|XP_011073788.1|6e-135PREDICTED: 60S ribosomal protein L13a-4 [Sesamum indicum]
JMFF013A07Sequence457005461 (28)ref|XP_010488596.1|2e-48PREDICTED: 60S ribosomal protein L13a-2 [Camelina sativa]
JMFF013G13Sequence536005461 (28)ref|XP_011073788.1|3e-90PREDICTED: 60S ribosomal protein L13a-4 [Sesamum indicum]659005461 (28)emb|CDP03876.1|5e-76unnamed protein product [Coffea canephora]
JMFF019G19Sequence535005461 (28)gb|EYU31410.1|2e-109hypothetical protein MIMGU_mgv1a013934mg [Erythranthe guttata]734005461 (28)emb|CDP03876.1|6e-110unnamed protein product [Coffea canephora]
JMFF025I01Sequence524005461 (28)gb|EYU31410.1|1e-108hypothetical protein MIMGU_mgv1a013934mg [Erythranthe guttata]657005461 (28)ref|XP_010488596.1|1e-96PREDICTED: 60S ribosomal protein L13a-2 [Camelina sativa]
JMFF025I24Sequence539005461 (28)ref|XP_009789164.1|9e-82PREDICTED: 60S ribosomal protein L13a-1 [Nicotiana sylvestris]697005461 (28)ref|XP_010488596.1|3e-94PREDICTED: 60S ribosomal protein L13a-2 [Camelina sativa]
JMFF029P20Sequence520005461 (28)ref|XP_011073788.1|4e-108PREDICTED: 60S ribosomal protein L13a-4 [Sesamum indicum]710005461 (28)emb|CDP03876.1|3e-113unnamed protein product [Coffea canephora]
JMFF032D16Sequence522005461 (28)ref|XP_009789164.1|9e-82PREDICTED: 60S ribosomal protein L13a-1 [Nicotiana sylvestris]707005461 (28)emb|CDP03876.1|1e-80unnamed protein product [Coffea canephora]
JMFF044L20Sequence647005461 (28)ref|XP_011073788.1|2e-132PREDICTED: 60S ribosomal protein L13a-4 [Sesamum indicum]618005461 (28)ref|XP_010488596.1|6e-67PREDICTED: 60S ribosomal protein L13a-2 [Camelina sativa]
JMFF051K02Sequence589005461 (28)ref|XP_009789164.1|6e-90PREDICTED: 60S ribosomal protein L13a-1 [Nicotiana sylvestris]
JMFF051K04Sequence635005461 (28)ref|XP_009789164.1|5e-95PREDICTED: 60S ribosomal protein L13a-1 [Nicotiana sylvestris]
JMSF001B05Sequence255005461 (28)ref|XP_008793237.1|3e-38PREDICTED: 60S ribosomal protein L13a-4 [Phoenix dactylifera]746005461 (28)ref|XP_011073788.1|2e-135PREDICTED: 60S ribosomal protein L13a-4 [Sesamum indicum]
JMSF032N24Sequence695005461 (28)ref|XP_011073788.1|9e-136PREDICTED: 60S ribosomal protein L13a-4 [Sesamum indicum]588005461 (28)ref|XP_010488596.1|5e-97PREDICTED: 60S ribosomal protein L13a-2 [Camelina sativa]

Contig 5461 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig005461============================================ 976         
  17  ----------------------------------------------------->JMFF032D16                                                
                                 <-----------------------------------------------------------------------rJMFF032D16  
  49  ----------------------------------------------------------------->JMFF044L20                                    
                                      <--------------------------------------------------------------rJMFF044L20  
  64 ------------------------------------------------------>JMFF008B16                                                
                          <------------------------------------------------------------------------rJMFF008B16  
  90 ------------------------------------------------------>JMFF019G19                                                
                    <---------------------------------------------------------------------------rJMFF019G19  
 121 ----------------------------------------------------->JMFF025I01                                                 
                          <------------------------------------------------------------------rJMFF025I01  
 124 ------------------------------------------------------->JMFF012F22                                               
      <-------------------------------------------------------------------------------------rJMFF012F22  
 137 ----------------------------------------------------->JMFF029P20                                                 
                   <-----------------------------------------------------------------------rJMFF029P20  
 142 ------------------------------------------------------------->JMFF006N06                                         
      <-----------------------------------------------------------------------------------rJMFF006N06  
 154 ------------------------------------------------------>JMFF025I24                                                
                  <----------------------------------------------------------------------rJMFF025I24  
 174 ------------------------------------------------------>JMFF013G13                                                
                   <-------------------------------------------------------------------rJMFF013G13  
 184 ---------------------------------------------------------------------->JMSF032N24                                
                         <------------------------------------------------------------rJMSF032N24  
 214 ------------------------->JMSF001B05                                                                             
      <----------------------------------------------------------------------------rJMSF001B05

The following clones don't have the opposite end in this pair.

     ------------------------------------------------------------>JMFF051K02-                                         
                                              <--------------------------------------------rJMFF013A07-               
                          <---------------------------------------------------------------rJMFF001B11-                
     ---------------------------------------------------------------->JMFF051K04-