clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFN018L18 | Sequence | 460 | 008073 (8) | ref|XP_004244188.1| | 1e-18 | PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein isoform | |||||
JMSF010D22 | Sequence | 333 | 008073 (8) | 733 | 008073 (8) | ref|XP_006360128.1| | 1e-87 | PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein-like is | |||
JMSF040B22 | Sequence | 280 | 008073 (8) | 839 | 008073 (8) | ref|XP_006360128.1| | 4e-94 | PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein-like is | |||
JMSF042K22 | Sequence | 783 | 008073 (8) | ref|XP_006360128.1| | 4e-81 | PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein-like is | 749 | 008073 (8) | ref|XP_009770748.1| | 5e-73 | PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein [Nicoti |
JMSF048J04 | Sequence | 692 | 008073 (8) | ref|XP_006360128.1| | 6e-34 | PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein-like is |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig008073============================================1501 3 ------------------>JMSF040B22 <-------------------------------------------------------rJMSF040B22 83 --------------------------------------------------->JMSF042K22 <-------------------------------------------------rJMSF042K22 191 ---------->JMSF010D22 <----------------------------------------------rJMSF010D22
The following clones don't have the opposite end in this pair.
------------------------------>JMFN018L18- --------------------------------------------->JMSF048J04-