clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF005H07 | Sequence | 433 | 010169 (15) | emb|CAI48072.1| | 5e-49 | glutathione S-transferase/peroxidase [Capsicum chinense] | 696 | 010169 (15) | ref|XP_009616058.1| | 6e-75 | PREDICTED: probable glutathione S-transferase [Nicotiana tomentosiformis] sp|Q03 |
JMFF009C24 | Sequence | 540 | 010169 (15) | emb|CAI48072.1| | 1e-68 | glutathione S-transferase/peroxidase [Capsicum chinense] | 794 | 010169 (15) | ref|XP_009616058.1| | 3e-97 | PREDICTED: probable glutathione S-transferase [Nicotiana tomentosiformis] sp|Q03 |
JMFF026D13 | Sequence | 208 | 010169 (15) | ref|XP_010323623.1| | 1e-08 | PREDICTED: probable glutathione S-transferase [Solanum lycopersicum] | 654 | 010169 (15) | emb|CAI48072.1| | 2e-75 | glutathione S-transferase/peroxidase [Capsicum chinense] |
JMFF037L24 | Sequence | 493 | 010169 (15) | emb|CAI48072.1| | 8e-50 | glutathione S-transferase/peroxidase [Capsicum chinense] | 790 | 010169 (15) | ref|XP_009616058.1| | 8e-107 | PREDICTED: probable glutathione S-transferase [Nicotiana tomentosiformis] sp|Q03 |
JMFF045J02 | Sequence | 599 | 010169 (15) | ref|XP_004243196.1| | 2e-81 | PREDICTED: probable glutathione S-transferase [Solanum lycopersicum] | 640 | 010169 (15) | ref|XP_009616058.1| | 1e-45 | PREDICTED: probable glutathione S-transferase [Nicotiana tomentosiformis] sp|Q03 |
JMFF045K20 | Sequence | 636 | 010169 (15) | ref|XP_004243196.1| | 9e-99 | PREDICTED: probable glutathione S-transferase [Solanum lycopersicum] | 588 | 010169 (15) | ref|XP_009616058.1| | 7e-58 | PREDICTED: probable glutathione S-transferase [Nicotiana tomentosiformis] sp|Q03 |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig010169============================================1104 1 ----------------------------------------------------->JMFF045J02 <---------------------------------------------------------rJMFF045J02 78 -------------------------------------->JMFF005H07 <--------------------------------------------------------------rJMFF005H07 78 ------------------------------------------------>JMFF009C24 <-----------------------------------------------------------------------rJMFF009C24 143 -------------------------------------------->JMFF037L24 <---------------------------------------------------------------------rJMFF037L24 149 ------------------>JMFF026D13 <--------------------------------------------------------rJMFF026D13 298 --------------------------------------------------------->JMFF045K20 <-----------------------------------rJMFF045K20
The following clones don't have the opposite end in this pair.
---------------------------->JMFF049K15# <-----------------------------------------rJMSF005B09* ------------------------->JMSF005D11#