| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF005P11 | Sequence | 465 | 010545 (18) | dbj|BAD91202.1| | 9e-60 | mitochondrial F1-ATPase gamma subunit [Ipomoea nil] | 768 | 010545 (18) | dbj|BAD91202.1| | 3e-113 | mitochondrial F1-ATPase gamma subunit [Ipomoea nil] |
| JMFF010I21 | Sequence | 537 | 010545 (18) | dbj|BAD91202.1| | 3e-90 | mitochondrial F1-ATPase gamma subunit [Ipomoea nil] | 601 | 010545 (18) | dbj|BAD91202.1| | 4e-50 | mitochondrial F1-ATPase gamma subunit [Ipomoea nil] |
| JMFF036N02 | Sequence | 576 | 010545 (18) | dbj|BAD91202.1| | 1e-88 | mitochondrial F1-ATPase gamma subunit [Ipomoea nil] | 713 | 010545 (18) | dbj|BAD91202.1| | 7e-95 | mitochondrial F1-ATPase gamma subunit [Ipomoea nil] |
| JMFF040B09 | Sequence | 179 | 010545 (18) | ref|XP_006440754.1| | 2e-31 | hypothetical protein CICLE_v100211691mg, partial [Citrus clementina] ref|XP_0064 | |||||
| JMFN019L24 | Sequence | 605 | 010545 (18) | sp|P26360.2|ATPG3_IPOBA | 9e-123 | RecName: Full=ATP synthase subunit gamma, mitochondrial; AltName: Full=F-ATPase | |||||
| JMFN020P19 | Sequence | 656 | 010545 (18) | dbj|BAF75379.1| | 1e-149 | gamma-subunit of the mitochondrial F1F0 ATP synthase [Ipomoea tricolor] | |||||
| JMFS029C01 | Sequence | 620 | 010545 (18) | dbj|BAD91202.1| | 4e-112 | mitochondrial F1-ATPase gamma subunit [Ipomoea nil] | |||||
| JMSF002C13 | Sequence | 333 | 010545 (18) | dbj|BAD91202.1| | 2e-26 | mitochondrial F1-ATPase gamma subunit [Ipomoea nil] | 715 | 010545 (18) | dbj|BAD91202.1| | 2e-96 | mitochondrial F1-ATPase gamma subunit [Ipomoea nil] |
| JMSF008K06 | Sequence | 414 | 010545 (18) | dbj|BAD91202.1| | 5e-47 | mitochondrial F1-ATPase gamma subunit [Ipomoea nil] | 784 | 010545 (18) | dbj|BAD91202.1| | 2e-108 | mitochondrial F1-ATPase gamma subunit [Ipomoea nil] |
| JMSF037P12 | Sequence | 670 | 010545 (18) | dbj|BAD91202.1| | 4e-124 | mitochondrial F1-ATPase gamma subunit [Ipomoea nil] | 669 | 010545 (18) | dbj|BAD91202.1| | 7e-63 | mitochondrial F1-ATPase gamma subunit [Ipomoea nil] |
| JMSF041J15 | Sequence | 806 | 010545 (18) | dbj|BAD91202.1| | 1e-159 | mitochondrial F1-ATPase gamma subunit [Ipomoea nil] | 559 | 010545 (18) | dbj|BAD91202.1| | 8e-60 | mitochondrial F1-ATPase gamma subunit [Ipomoea nil] |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig010545============================================1390 23 -------------------------------->JMFF005P11 <------------------------------------------------------rJMFF005P11 25 ----------------------------->JMSF008K06 <-------------------------------------------------------rJMSF008K06 35 ----------------------->JMSF002C13 <-------------------------------------------------rJMSF002C13 37 ---------------------------------------->JMFF036N02 <------------------------------------------------rJMFF036N02 47 -------------------------------------->JMFF010I21 <----------------------------------------rJMFF010I21 84 ----------------------------------------------->JMSF037P12 <----------------------------------------rJMSF037P12 86 --------------------------------------------------------->JMSF041J15 <--------------------------------------rJMSF041J15
The following clones don't have the opposite end in this pair.
-------------------------------------------->JMFS029C01- --------------------------------------------->JMFN020P19- <------------rJMFF040B09- ------------------------------------>JMFN019L24-