List of clones in pair P015049.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002J22Sequence530006346 (33)ref|XP_006304215.1|3e-61hypothetical protein CARUB_v10010325mg [Capsella rubella] gb|EOA37113.1| hypothe790006346 (33)ref|XP_009623992.1|4e-55PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit [Nicotiana tomentosi
JMFF009A06Sequence569006346 (33)ref|XP_006304215.1|1e-61hypothetical protein CARUB_v10010325mg [Capsella rubella] gb|EOA37113.1| hypothe674006346 (33)ref|XP_009804090.1|5e-55PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit [Nicotiana sylvestri
JMFF009A17Sequence330006346 (33)ref|XP_007017704.1|2e-22Vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4 isoform 2, partial [The144006346 (33)
JMFF015D01Sequence564006346 (33)ref|XP_006304215.1|2e-68hypothetical protein CARUB_v10010325mg [Capsella rubella] gb|EOA37113.1| hypothe646006346 (33)ref|XP_004232469.1|1e-63PREDICTED: V-type proton ATPase subunit c2 [Solanum lycopersicum] ref|XP_0042383
JMFF015I05Sequence559006346 (33)ref|XP_006304215.1|6e-68hypothetical protein CARUB_v10010325mg [Capsella rubella] gb|EOA37113.1| hypothe636006346 (33)ref|XP_009623992.1|5e-60PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit [Nicotiana tomentosi
JMFF016C14Sequence640006346 (33)ref|XP_006304215.1|1e-72hypothetical protein CARUB_v10010325mg [Capsella rubella] gb|EOA37113.1| hypothe675006346 (33)ref|XP_009804090.1|5e-55PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit [Nicotiana sylvestri
JMFF024H21Sequence526006346 (33)ref|XP_006304215.1|4e-61hypothetical protein CARUB_v10010325mg [Capsella rubella] gb|EOA37113.1| hypothe794006346 (33)ref|XP_006304215.1|6e-72hypothetical protein CARUB_v10010325mg [Capsella rubella] gb|EOA37113.1| hypothe
JMFF028E03Sequence547006346 (33)ref|XP_006304215.1|4e-68hypothetical protein CARUB_v10010325mg [Capsella rubella] gb|EOA37113.1| hypothe666006346 (33)ref|NP_001233967.1|204V-type proton ATPase 16 kDa proteolipid subunit [Solanum lycopersicum] ref|NP_00
JMFF028F03Sequence545006346 (33)ref|XP_006304215.1|4e-68hypothetical protein CARUB_v10010325mg [Capsella rubella] gb|EOA37113.1| hypothe638006346 (33)ref|XP_004232469.1|6e-60PREDICTED: V-type proton ATPase subunit c2 [Solanum lycopersicum] ref|XP_0042383
JMFF028K16Sequence510006346 (33)ref|XP_006304215.1|2e-61hypothetical protein CARUB_v10010325mg [Capsella rubella] gb|EOA37113.1| hypothe690006346 (33)ref|XP_009804090.1|2e-68PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit [Nicotiana sylvestri
JMFF034N11Sequence573006346 (33)ref|XP_006304215.1|3e-72hypothetical protein CARUB_v10010325mg [Capsella rubella] gb|EOA37113.1| hypothe697006346 (33)ref|XP_009804090.1|5e-54PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit [Nicotiana sylvestri
JMFF037K18Sequence547006346 (33)ref|XP_006304215.1|2e-54hypothetical protein CARUB_v10010325mg [Capsella rubella] gb|EOA37113.1| hypothe649006346 (33)ref|XP_009623992.1|2e-53PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit [Nicotiana tomentosi
JMFF043F18Sequence619006346 (33)ref|XP_006304215.1|1e-72hypothetical protein CARUB_v10010325mg [Capsella rubella] gb|EOA37113.1| hypothe697006346 (33)ref|NP_001235615.1|6e-14uncharacterized protein LOC100500014 [Glycine max] gb|ACU14596.1| unknown [Glyci
JMFN013L12Sequence644006346 (33)ref|XP_006304215.1|2e-72hypothetical protein CARUB_v10010325mg [Capsella rubella] gb|EOA37113.1| hypothe
JMSF002C22Sequence326006346 (33)ref|XP_006304215.1|9e-36hypothetical protein CARUB_v10010325mg [Capsella rubella] gb|EOA37113.1| hypothe681006346 (33)ref|XP_009804090.1|4e-69PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit [Nicotiana sylvestri
JMSF020L06Sequence671006346 (33)ref|XP_006304215.1|2e-72hypothetical protein CARUB_v10010325mg [Capsella rubella] gb|EOA37113.1| hypothe710006346 (33)ref|XP_009625822.1|2e-67PREDICTED: V-type proton ATPase subunit c1 [Nicotiana tomentosiformis]
JMSF038P11Sequence663006346 (33)ref|XP_006304215.1|1e-72hypothetical protein CARUB_v10010325mg [Capsella rubella] gb|EOA37113.1| hypothe798006346 (33)ref|XP_006304215.1|6e-72hypothetical protein CARUB_v10010325mg [Capsella rubella] gb|EOA37113.1| hypothe

Contig 6346 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig006346============================================ 920         
  24    ------------------------------------------------------------------->JMFF043F18                                
                                           <-------------------------------------------------------------rJMFF043F18  
 102 --------------------------------------------------------->JMFF002J22                                             
        <-------------------------------------------------------------------------------------rJMFF002J22  
 107 -------------------------------------------------------->JMFF024H21                                              
       <--------------------------------------------------------------------------------------rJMFF024H21  
 107 ------------------------------------------------------------->JMFF015D01                                         
                       <----------------------------------------------------------------------rJMFF015D01  
 108 ------------------------------------------------------------->JMFF009A06                                         
                    <-------------------------------------------------------------------------rJMFF009A06  
 114   -------------------------------------------------------------->JMFF034N11                                      
                   <--------------------------------------------------------------------------rJMFF034N11  
 114 ----------------------------------->JMSF002C22                                                                   
                    <------------------------------------------------------------------------rJMSF002C22  
 115 ------------------------------------------------------------>JMFF015I05                                          
                        <--------------------------------------------------------------------rJMFF015I05  
 116   ----------------------------------------------------------->JMFF028E03                                         
                       <----------------------------------------------------------------------rJMFF028E03  
 116   ------------------------------------------------------------------------>JMSF038P11                            
       <--------------------------------------------------------------------------------------rJMSF038P11  
 118   ------------------------------------------------------->JMFF028K16                                             
                    <-------------------------------------------------------------------------rJMFF028K16  
 122   ---------------------------------------------------------->JMFF028F03                                          
                       <---------------------------------------------------------------------rJMFF028F03  
 123   ----------------------------------------------------------->JMFF037K18                                         
                      <----------------------------------------------------------------------rJMFF037K18  
 124   --------------------------------------------------------------------->JMFF016C14                               
                    <-------------------------------------------------------------------------rJMFF016C14  
 130   ------------------------------------------------------------------------>JMSF020L06                            
                <----------------------------------------------------------------------------rJMSF020L06  
 139 ----------------------------------->JMFF009A17                                                                   
                                                                          <---------------rJMFF009A17

The following clones don't have the opposite end in this pair.

       -------------------------------------------------------------------->JMFN013L12-