List of clones in pair P015017.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009P10Sequence546005186 (43)ref|XP_009611990.1|2e-96PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Nicotiana tomento616005186 (43)gb|KHG29208.1|6e-82Chlorophyll a-b binding 13, chloroplastic [Gossypium arboreum]
JMFF047F21Sequence640005186 (43)ref|XP_009611990.1|3e-130PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Nicotiana tomento612005186 (43)ref|XP_006451998.1|7e-110hypothetical protein CICLE_v10009198mg [Citrus clementina] ref|XP_006464671.1| P
JMFF050F11Sequence519005186 (43)ref|XP_009611990.1|2e-88PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Nicotiana tomento
JMFN001C09Sequence564005186 (43)ref|XP_006451998.1|5e-127hypothetical protein CICLE_v10009198mg [Citrus clementina] ref|XP_006464671.1| P
JMFN002E04Sequence567005186 (43)ref|XP_006451998.1|2e-108hypothetical protein CICLE_v10009198mg [Citrus clementina] ref|XP_006464671.1| P
JMFN008D21Sequence608005186 (43)ref|XP_009611990.1|2e-114PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Nicotiana tomento
JMFN008J02Sequence603005186 (43)ref|XP_009611990.1|8e-115PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Nicotiana tomento
JMFN009A12Sequence616005186 (43)ref|XP_009611990.1|7e-118PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Nicotiana tomento
JMFN012B17Sequence618005186 (43)ref|XP_009611990.1|7e-117PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Nicotiana tomento
JMFN012C10Sequence625005186 (43)gb|KHG13557.1|2e-134Chlorophyll a-b binding 13, chloroplastic [Gossypium arboreum] gb|KHG19057.1| Ch
JMFN015B15Sequence593005186 (43)ref|XP_009611990.1|3e-113PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Nicotiana tomento
JMFN028P04Sequence414005186 (43)gb|KDP38946.1|5e-62hypothetical protein JCGZ_00703 [Jatropha curcas]
JMFN039G12Sequence622005186 (43)ref|XP_009611990.1|8e-123PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Nicotiana tomento
JMFN040P02Sequence626005186 (43)ref|XP_009611990.1|1e-119PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Nicotiana tomento
JMFN043E10Sequence611005186 (43)ref|XP_009611990.1|2e-123PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Nicotiana tomento
JMFN043L10Sequence607005186 (43)ref|XP_009611990.1|2e-115PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Nicotiana tomento
JMFS077C10Sequence617005186 (43)ref|XP_009611990.1|1e-118PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Nicotiana tomento
JMSF001G21Sequence277005186 (43)ref|XP_009611990.1|2e-39PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Nicotiana tomento739005186 (43)ref|XP_006349989.1|7e-127PREDICTED: chlorophyll a-b binding protein 13, chloroplastic-like [Solanum tube
JMSF011N20Sequence325005186 (43)ref|XP_009611990.1|1e-50PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Nicotiana tomento722005186 (43)ref|XP_007133149.1|8e-155hypothetical protein PHAVU_011G155700g [Phaseolus vulgaris] gb|ESW05143.1| hypot
JMSF013J12Sequence410005186 (43)ref|XP_009611990.1|2e-73PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Nicotiana tomento736005186 (43)gb|KHG13557.1|1e-147Chlorophyll a-b binding 13, chloroplastic [Gossypium arboreum] gb|KHG19057.1| Ch
JMSF015H21Sequence430005186 (43)ref|XP_009611990.1|2e-67PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Nicotiana tomento766005186 (43)ref|XP_007133149.1|2e-153hypothetical protein PHAVU_011G155700g [Phaseolus vulgaris] gb|ESW05143.1| hypot
JMSF020K23Sequence656005186 (43)ref|XP_009611990.1|3e-124PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Nicotiana tomento604005186 (43)ref|XP_006451998.1|2e-92hypothetical protein CICLE_v10009198mg [Citrus clementina] ref|XP_006464671.1| P
JMSF024N04Sequence673005186 (43)ref|XP_009611990.1|8e-138PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Nicotiana tomento675005186 (43)gb|KHG29208.1|5e-130Chlorophyll a-b binding 13, chloroplastic [Gossypium arboreum]
JMSF031D22Sequence576005186 (43)ref|XP_009611990.1|8e-103PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Nicotiana tomento621005186 (43)gb|KHG13557.1|2e-98Chlorophyll a-b binding 13, chloroplastic [Gossypium arboreum] gb|KHG19057.1| Ch
JMSF033D22Sequence577005186 (43)ref|XP_009611990.1|7e-99PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Nicotiana tomento
JMSF033I05Sequence684005186 (43)ref|XP_009611990.1|9e-131PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Nicotiana tomento686005186 (43)gb|KHG13557.1|7e-137Chlorophyll a-b binding 13, chloroplastic [Gossypium arboreum] gb|KHG19057.1| Ch
JMSF043G18Sequence414005186 (43)ref|XP_009611990.1|1e-69PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Nicotiana tomento
JMSF047J09Sequence685005186 (43)ref|XP_009611990.1|9e-131PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Nicotiana tomento753005186 (43)ref|XP_007133149.1|9e-153hypothetical protein PHAVU_011G155700g [Phaseolus vulgaris] gb|ESW05143.1| hypot
JMSF049D01Sequence660005186 (43)ref|XP_009611990.1|9e-123PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Nicotiana tomento739005186 (43)ref|XP_007133149.1|4e-149hypothetical protein PHAVU_011G155700g [Phaseolus vulgaris] gb|ESW05143.1| hypot

Contig 5186 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig005186============================================ 984         
  43 ------------------------------------------------------>JMFF009P10                                                
                                       <-------------------------------------------------------------rJMFF009P10  
  47      ---------------------------------------------------------------->JMFF047F21                                 
                                           <-------------------------------------------------------------rJMFF047F21  
  54 ------------------------------------------------------------------>JMSF049D01                                    
                         <--------------------------------------------------------------------------rJMSF049D01  
  57  ------------------------------------------------------------------>JMSF020K23                                   
                                      <-------------------------------------------------------------rJMSF020K23  
  57  --------------------------------------------------------------------->JMSF033I05                                
                              <---------------------------------------------------------------------rJMSF033I05  
  57  --------------------------------------------------------------------->JMSF047J09                                
                       <----------------------------------------------------------------------------rJMSF047J09  
  60  ------------------------------------------>JMSF015H21                                                           
                      <-----------------------------------------------------------------------------rJMSF015H21  
  64 --------------------------------------------------------->JMSF031D22                                             
                                    <--------------------------------------------------------------rJMSF031D22  
  96      ----------------------------------------->JMSF013J12                                                        
                         <--------------------------------------------------------------------------rJMSF013J12  
  96      -------------------------------------------------------------------->JMSF024N04                             
                               <--------------------------------------------------------------------rJMSF024N04  
 131      ------------------------------->JMSF011N20                                                                  
                       <------------------------------------------------------------------------rJMSF011N20  
 166      --------------------------->JMSF001G21                                                                      
                 <--------------------------------------------------------------------------rJMSF001G21

The following clones don't have the opposite end in this pair.

          ----------------------------------------->JMSF043G18-                                                       
      ----------------------------------------->JMSF001J10*                                                           
       ----------------------------------------------------------->JMFN015B15-                                        
       ------------------------------------------------------------->JMFN008D21-                                      
        -------------------------------------------------------------->JMFN039G12-                                    
       -------------------------------------------------------------->JMFS077C10-                                     
        --------------------------------------------------------------->JMFN040P02-                                   
      ---------------------------------------------------->JMFF050F11-                                                
          ------------------------------------------------------------->JMFN043E10-                                   
       ------------------------------------------------------------>JMFN008J02-                                       
          ----------------------------------------------------->JMFF019I09#                                           
       -------------------------------------------------------------->JMFN012B17-                                     
     ---------------------------------------------------------->JMSF033D22-                                           
                         ------------------------------------------------------------>JMFN012C10-                     
                                    -------------------------------------------------------->JMFN001C09-              
       ------------------------------------------------------------->JMFN043L10-                                      
       -------------------------------------------------------------->JMFN009A12-                                     
                                           --------------------------------------------------------->JMFN002E04-      
                                                              ---------------------------------------->JMFN028P04-