| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF001L21 | Sequence | 537 | 003720 (17) | ref|XP_009612279.1| | 2e-91 | PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic [Nicotiana tomento | 704 | 003720 (17) | gb|AFH57997.1| | 1e-102 | chloroplast PsbO1 precursor [Nicotiana benthamiana] |
| JMFF008N11 | Sequence | 576 | 003720 (17) | ref|XP_009612279.1| | 3e-97 | PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic [Nicotiana tomento | 763 | 003720 (17) | ref|XP_009612279.1| | 8e-75 | PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic [Nicotiana tomento |
| JMFF015G05 | Sequence | 571 | 003720 (17) | ref|XP_009612279.1| | 2e-95 | PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic [Nicotiana tomento | 741 | 003720 (17) | gb|AFH57997.1| | 9e-101 | chloroplast PsbO1 precursor [Nicotiana benthamiana] |
| JMFF051M09 | Sequence | 570 | 003720 (17) | ref|XP_009612279.1| | 1e-99 | PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic [Nicotiana tomento | 567 | 003720 (17) | gb|EPS61846.1| | 1e-53 | oxygen-evolving enhancer protein 1, chloroplastic [Genlisea aurea] |
| JMFS125H04 | Sequence | 556 | 003720 (17) | ref|XP_009612279.1| | 9e-104 | PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic [Nicotiana tomento | |||||
| JMSF029D11 | Sequence | 674 | 003720 (17) | ref|XP_009612279.1| | 1e-121 | PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic [Nicotiana tomento | 762 | 003720 (17) | gb|AFH57997.1| | 2e-112 | chloroplast PsbO1 precursor [Nicotiana benthamiana] |
| JMSF035I24 | Sequence | 666 | 003720 (17) | ref|XP_009612279.1| | 7e-127 | PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic [Nicotiana tomento | |||||
| JMSF036A08 | Sequence | 678 | 003720 (17) | ref|XP_009612279.1| | 2e-127 | PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic [Nicotiana tomento | 746 | 003720 (17) | gb|AFH57997.1| | 5e-118 | chloroplast PsbO1 precursor [Nicotiana benthamiana] |
| JMSF042C13 | Sequence | 742 | 003720 (17) | ref|XP_009612279.1| | 6e-143 | PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic [Nicotiana tomento | 774 | 003720 (17) | gb|AFH57997.1| | 1e-120 | chloroplast PsbO1 precursor [Nicotiana benthamiana] |
| JMSF051N18 | Sequence | 587 | 003720 (17) | ref|XP_009612279.1| | 1e-104 | PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic [Nicotiana tomento | |||||
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig003720============================================1316 2 ------------------------------------------->JMFF008N11 <---------------------------------------------------------rJMFF008N11 40 ------------------------------------------>JMFF015G05 <------------------------------------------------------rJMFF015G05 44 -------------------------------------------------->JMSF029D11 <---------------------------------------------------------rJMSF029D11 61 ------------------------------------------>JMFF051M09 <---------------------------------------rJMFF051M09 83 ---------------------------------------->JMFF001L21 <----------------------------------------------------rJMFF001L21 95 ------------------------------------------------------->JMSF042C13 <----------------------------------------------------------rJMSF042C13 110 -------------------------------------------------->JMSF036A08 <--------------------------------------------------------rJMSF036A08
The following clones don't have the opposite end in this pair.
------------------------------------------->JMSF051N18- ------------------------------------------------->JMSF035I24- ----------------------------------------->JMFS125H04-