| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF028B01 | Sequence | 552 | 009296 (14) | ref|XP_009769789.1| | 217 | PREDICTED: PHD finger protein ALFIN-LIKE 4-like [Nicotiana sylvestris] | 615 | 009296 (14) | ref|XP_002276358.1| | 5e-34 | PREDICTED: PHD finger protein ALFIN-LIKE 4 [Vitis vinifera] emb|CBI35899.3| unna |
| JMFF041L02 | Sequence | 646 | 009296 (14) | ref|XP_006371893.1| | 3e-79 | hypothetical protein POPTR_0018s05470g [Populus trichocarpa] gb|ERP49690.1| hypo | 603 | 009296 (14) | ref|XP_011011112.1| | 4e-34 | PREDICTED: PHD finger protein ALFIN-LIKE 4-like isoform X1 [Populus euphratica] |
| JMFF043G10 | Sequence | 634 | 009296 (14) | ref|XP_006582916.1| | 1e-75 | PREDICTED: uncharacterized protein LOC100794662 isoform X1 [Glycine max] | 630 | 009296 (14) | gb|KJB82904.1| | 3e-32 | hypothetical protein B456_013G226400 [Gossypium raimondii] |
| JMFF046E18 | Sequence | 626 | 009296 (14) | ref|XP_009621404.1| | 194 | PREDICTED: PHD finger protein ALFIN-LIKE 4-like [Nicotiana tomentosiformis] | 612 | 009296 (14) | ref|XP_006371893.1| | 5e-37 | hypothetical protein POPTR_0018s05470g [Populus trichocarpa] gb|ERP49690.1| hypo |
| JMFF046L15 | Sequence | 583 | 009296 (14) | ref|XP_009621404.1| | 170 | PREDICTED: PHD finger protein ALFIN-LIKE 4-like [Nicotiana tomentosiformis] | 439 | 009296 (14) | gb|KJB82904.1| | 8e-29 | hypothetical protein B456_013G226400 [Gossypium raimondii] |
| JMSF004O11 | Sequence | 188 | 009296 (14) | 222 | 009296 (14) | ||||||
| JMSF020K24 | Sequence | 671 | 009296 (14) | gb|KDP34051.1| | 1e-71 | hypothetical protein JCGZ_07622 [Jatropha curcas] | 750 | 009296 (14) | ref|XP_006371893.1| | 2e-80 | hypothetical protein POPTR_0018s05470g [Populus trichocarpa] gb|ERP49690.1| hypo |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig009296============================================1395 71 ------------------------------------------->JMFF046E18 <-------------------------------------------rJMFF046E18 131 --------------------------------------------->JMFF043G10 <--------------------------------------------rJMFF043G10 158 ----------------------------------------------->JMSF020K24 <-----------------------------------------------------rJMSF020K24 166 ------------------------------------->JMFF046L15 <----------------------------rJMFF046L15 175 --------------------------------------------->JMFF041L02 <------------------------------------------rJMFF041L02 198 ------------>JMSF004O11 <---------------rJMSF004O11 238 --------------------------------------->JMFF028B01 <-----------------------------------------rJMFF028B01
The following clones don't have the opposite end in this pair.