clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF018O03 | Sequence | 623 | 004594 (24) | ref|XP_009627814.1| | 7e-68 | PREDICTED: plastidial pyruvate kinase 2 [Nicotiana tomentosiformis] | 732 | 004594 (24) | ref|XP_009627814.1| | 7e-116 | PREDICTED: plastidial pyruvate kinase 2 [Nicotiana tomentosiformis] |
JMFF020K20 | Sequence | 524 | 004594 (24) | gb|KDO56167.1| | 3e-117 | hypothetical protein CISIN_1g008112mg [Citrus sinensis] | 736 | 004594 (24) | ref|XP_009627814.1| | 3e-117 | PREDICTED: plastidial pyruvate kinase 2 [Nicotiana tomentosiformis] |
JMFF022B04 | Sequence | 525 | 004594 (24) | ref|XP_009627814.1| | 1e-30 | PREDICTED: plastidial pyruvate kinase 2 [Nicotiana tomentosiformis] | 739 | 004594 (24) | ref|XP_009627814.1| | 2e-116 | PREDICTED: plastidial pyruvate kinase 2 [Nicotiana tomentosiformis] |
JMFF026B24 | Sequence | 604 | 004594 (24) | ref|XP_009627814.1| | 2e-64 | PREDICTED: plastidial pyruvate kinase 2 [Nicotiana tomentosiformis] | 746 | 004594 (24) | ref|XP_009627814.1| | 2e-117 | PREDICTED: plastidial pyruvate kinase 2 [Nicotiana tomentosiformis] |
JMFF028O05 | Sequence | 608 | 004594 (24) | ref|XP_009627814.1| | 7e-70 | PREDICTED: plastidial pyruvate kinase 2 [Nicotiana tomentosiformis] | 735 | 004594 (24) | ref|XP_009627814.1| | 2e-116 | PREDICTED: plastidial pyruvate kinase 2 [Nicotiana tomentosiformis] |
JMFF032F12 | Sequence | 571 | 004594 (24) | gb|KDO56167.1| | 2e-130 | hypothetical protein CISIN_1g008112mg [Citrus sinensis] | 816 | 004594 (24) | ref|XP_009627814.1| | 5e-137 | PREDICTED: plastidial pyruvate kinase 2 [Nicotiana tomentosiformis] |
JMFF034L01 | Sequence | 613 | 004594 (24) | ref|XP_010662621.1| | 3e-33 | PREDICTED: plastidial pyruvate kinase 2 [Vitis vinifera] emb|CBI22578.3| unnamed | 726 | 004594 (24) | ref|XP_009627814.1| | 4e-115 | PREDICTED: plastidial pyruvate kinase 2 [Nicotiana tomentosiformis] |
JMFF042G22 | Sequence | 620 | 004594 (24) | ref|XP_009627814.1| | 2e-73 | PREDICTED: plastidial pyruvate kinase 2 [Nicotiana tomentosiformis] | 620 | 004594 (24) | ref|XP_009794471.1| | 3e-83 | PREDICTED: plastidial pyruvate kinase 2 [Nicotiana sylvestris] |
JMFN044M17 | Sequence | 423 | 004594 (24) | gb|ACJ85830.1| | 8e-48 | unknown [Medicago truncatula] | |||||
JMFS090H07 | Sequence | 623 | 004594 (24) | ref|XP_006366641.1| | 7e-139 | PREDICTED: plastidial pyruvate kinase 2-like [Solanum tuberosum] | |||||
JMSF027E04 | Sequence | 625 | 004594 (24) | ref|XP_009627814.1| | 6e-91 | PREDICTED: plastidial pyruvate kinase 2 [Nicotiana tomentosiformis] | 771 | 004594 (24) | ref|XP_009627814.1| | 4e-129 | PREDICTED: plastidial pyruvate kinase 2 [Nicotiana tomentosiformis] |
JMSF050D19 | Sequence | 595 | 004594 (24) | ref|XP_009627814.1| | 6e-70 | PREDICTED: plastidial pyruvate kinase 2 [Nicotiana tomentosiformis] | 785 | 004594 (24) | ref|XP_009627814.1| | 4e-129 | PREDICTED: plastidial pyruvate kinase 2 [Nicotiana tomentosiformis] |
JMSF051D19 | Sequence | 415 | 004594 (24) | ref|XP_009627814.1| | 6e-45 | PREDICTED: plastidial pyruvate kinase 2 [Nicotiana tomentosiformis] | 285 | 004594 (24) | ref|XP_011076072.1| | 1e-42 | PREDICTED: plastidial pyruvate kinase 2-like [Sesamum indicum] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig004594============================================2107 5 ----------------------------->JMFF018O03 <----------------------------------rJMFF018O03 7 ---------------------------->JMFF034L01 <----------------------------------rJMFF034L01 22 --------------------------->JMFF026B24 <----------------------------------rJMFF026B24 26 ------------------------>JMFF022B04 <----------------------------------rJMFF022B04 39 ---------------------------->JMFF028O05 <---------------------------------rJMFF028O05 82 --------------------------->JMSF050D19 <----------------------------------rJMSF050D19 134 ----------------------------->JMSF027E04 <----------------------------------rJMSF027E04 215 ----------------------------->JMFF042G22 <-------------------rJMFF042G22 299 ------------------->JMSF051D19 <------------rJMSF051D19 586 -------------------------->JMFF032F12 <------------------------------------rJMFF032F12 587 ------------------------>JMFF020K20 <----------------------------------rJMFF020K20
The following clones don't have the opposite end in this pair.
---------------------------->JMFS090H07- ----------------->JMFN044M17-