| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF004C21 | Sequence | 555 | 004952 (33) | ref|XP_011099984.1| | 1e-45 | PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Sesamum indicum] | 772 | 004952 (33) | ref|XP_006353172.1| | 2e-82 | PREDICTED: uncharacterized protein At1g04910-like isoform X1 [Solanum tuberosum |
| JMFF006H14 | Sequence | 584 | 004952 (33) | ref|XP_011099984.1| | 2e-57 | PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Sesamum indicum] | 808 | 004952 (33) | ref|XP_006353172.1| | 9e-119 | PREDICTED: uncharacterized protein At1g04910-like isoform X1 [Solanum tuberosum |
| JMFF009F22 | Sequence | 603 | 004952 (33) | ref|XP_011099984.1| | 2e-45 | PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Sesamum indicum] | 739 | 004952 (33) | gb|KDP29763.1| | 7e-134 | hypothetical protein JCGZ_18698 [Jatropha curcas] |
| JMFF014K15 | Sequence | 526 | 004952 (33) | ref|XP_009350346.1| | 3e-103 | PREDICTED: uncharacterized protein At1g04910-like isoform X1 [Pyrus x bretschne | 770 | 004952 (33) | ref|XP_006353172.1| | 3e-94 | PREDICTED: uncharacterized protein At1g04910-like isoform X1 [Solanum tuberosum |
| JMFF018H04 | Sequence | 567 | 004952 (33) | ref|XP_011099984.1| | 8e-40 | PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Sesamum indicum] | 735 | 004952 (33) | ref|XP_006353172.1| | 5e-105 | PREDICTED: uncharacterized protein At1g04910-like isoform X1 [Solanum tuberosum |
| JMFF021D12 | Sequence | 571 | 004952 (33) | ref|XP_011099984.1| | 4e-37 | PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Sesamum indicum] | 688 | 004952 (33) | ref|XP_006353172.1| | 1e-114 | PREDICTED: uncharacterized protein At1g04910-like isoform X1 [Solanum tuberosum |
| JMFF031F14 | Sequence | 594 | 004952 (33) | ref|XP_011099984.1| | 5e-37 | PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Sesamum indicum] | |||||
| JMFF035K07 | Sequence | 608 | 004952 (33) | ref|XP_011099984.1| | 1e-44 | PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Sesamum indicum] | 612 | 004952 (33) | ref|XP_006353172.1| | 1e-74 | PREDICTED: uncharacterized protein At1g04910-like isoform X1 [Solanum tuberosum |
| JMFF045E06 | Sequence | 634 | 004952 (33) | ref|XP_011099984.1| | 2e-62 | PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Sesamum indicum] | 649 | 004952 (33) | gb|KHG22139.1| | 4e-133 | hypothetical protein F383_05782 [Gossypium arboreum] |
| JMFF045L12 | Sequence | 673 | 004952 (33) | gb|KDP29763.1| | 1e-99 | hypothetical protein JCGZ_18698 [Jatropha curcas] | 581 | 004952 (33) | ref|XP_006353172.1| | 2e-58 | PREDICTED: uncharacterized protein At1g04910-like isoform X1 [Solanum tuberosum |
| JMFN003D15 | Sequence | 612 | 004952 (33) | ref|XP_006353172.1| | 2e-64 | PREDICTED: uncharacterized protein At1g04910-like isoform X1 [Solanum tuberosum | |||||
| JMFN003N21 | Sequence | 401 | 004952 (33) | ref|XP_011099984.1| | 3e-20 | PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Sesamum indicum] | |||||
| JMFN025B06 | Sequence | 474 | 004952 (33) | ref|XP_006353173.1| | 3e-40 | PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Solanum tuberosum | |||||
| JMFN042O10 | Sequence | 537 | 004952 (33) | ref|XP_006353173.1| | 3e-48 | PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Solanum tuberosum | |||||
| JMFN045P11 | Sequence | 630 | 004952 (33) | ref|XP_006353173.1| | 1e-91 | PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Solanum tuberosum | |||||
| JMFS003C01 | Sequence | 567 | 004952 (33) | ref|XP_011099984.1| | 2e-61 | PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Sesamum indicum] | |||||
| JMFS025G02 | Sequence | 626 | 004952 (33) | ref|XP_011099984.1| | 2e-49 | PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Sesamum indicum] | |||||
| JMFS032D04 | Sequence | 486 | 004952 (33) | ref|XP_011099984.1| | 3e-35 | PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Sesamum indicum] | |||||
| JMFS045G12 | Sequence | 619 | 004952 (33) | gb|KJB18178.1| | 5e-115 | hypothetical protein B456_003G038000 [Gossypium raimondii] | |||||
| JMFS050F12 | Sequence | 595 | 004952 (33) | ref|XP_011099984.1| | 1e-39 | PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Sesamum indicum] | |||||
| JMSF005M12 | Sequence | 324 | 004952 (33) | 343 | 004952 (33) | ref|XP_011097478.1| | 9e-22 | PREDICTED: uncharacterized protein At1g04910-like [Sesamum indicum] | |||
| JMSF024A13 | Sequence | 673 | 004952 (33) | ref|XP_011099984.1| | 5e-57 | PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Sesamum indicum] | 754 | 004952 (33) | ref|XP_006353172.1| | 2e-119 | PREDICTED: uncharacterized protein At1g04910-like isoform X1 [Solanum tuberosum |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig004952============================================1976 67 --------------->JMSF005M12 <----------------rJMSF005M12 84 ------------------------------>JMFF035K07 <------------------------------rJMFF035K07 100 --------------------------->JMFF004C21 <--------------------------------------rJMFF004C21 101 ---------------------------->JMFF018H04 <------------------------------------rJMFF018H04 107 --------------------------------->JMSF024A13 <-------------------------------------rJMSF024A13 181 ----------------------------->JMFF006H14 <----------------------------------------rJMFF006H14 198 ------------------------------>JMFF009F22 <-------------------------------------rJMFF009F22 223 ---------------------------->JMFF021D12 <--------------------------------rJMFF021D12 915 ------------------------------->JMFF045E06 <--------------------------------rJMFF045E06 999 -------------------------------->JMFF045L12 <----------------------------rJMFF045L12 1020 -------------------------->JMFF014K15 <--------------------------------------rJMFF014K15
The following clones don't have the opposite end in this pair.
------------------------------->JMFS025G02- ------------------------------>JMFS045G12- ------------------------------->JMFN045P11- ----------------------------->JMFS050F12- -------------------------->JMFN042O10- ---------------------------->JMFS003C01- ------------------->JMFN003N21- ------------------------------>JMFN003D15- ----------------------------->JMFF031F14- ----------------------->JMFS032D04- ----------------------->JMFN025B06-