clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF020P16 | Sequence | 578 | 000112 (13) | ref|XP_010324012.1| | 139 | PREDICTED: uncharacterized protein LOC101256396 [Solanum lycopersicum] | 714 | 000112 (13) | ref|XP_009596806.1| | 240 | PREDICTED: uncharacterized protein LOC104092833 [Nicotiana tomentosiformis] |
JMFF034E14 | Sequence | 582 | 000112 (13) | ref|XP_009596806.1| | 164 | PREDICTED: uncharacterized protein LOC104092833 [Nicotiana tomentosiformis] | 661 | 000112 (13) | ref|XP_009596806.1| | 216 | PREDICTED: uncharacterized protein LOC104092833 [Nicotiana tomentosiformis] |
JMFF039I16 | Sequence | 518 | 000112 (13) | ref|XP_009596806.1| | 171 | PREDICTED: uncharacterized protein LOC104092833 [Nicotiana tomentosiformis] | 718 | 000112 (13) | ref|XP_009596806.1| | 242 | PREDICTED: uncharacterized protein LOC104092833 [Nicotiana tomentosiformis] |
JMFF040L08 | Sequence | 518 | 000112 (13) | ref|XP_009596806.1| | 171 | PREDICTED: uncharacterized protein LOC104092833 [Nicotiana tomentosiformis] | 716 | 000112 (13) | ref|XP_009596806.1| | 240 | PREDICTED: uncharacterized protein LOC104092833 [Nicotiana tomentosiformis] |
JMFN001D09 | Sequence | 441 | 000112 (13) | ref|XP_009596806.1| | 127 | PREDICTED: uncharacterized protein LOC104092833 [Nicotiana tomentosiformis] | |||||
JMFN009G21 | Sequence | 627 | 000112 (13) | ref|XP_009596806.1| | 190 | PREDICTED: uncharacterized protein LOC104092833 [Nicotiana tomentosiformis] | |||||
JMFS049F04 | Sequence | 615 | 000112 (13) | ref|XP_009596806.1| | 191 | PREDICTED: uncharacterized protein LOC104092833 [Nicotiana tomentosiformis] | |||||
JMSF005F10 | Sequence | 458 | 000112 (13) | ref|XP_010324012.1| | 141 | PREDICTED: uncharacterized protein LOC101256396 [Solanum lycopersicum] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig000112============================================1024 58 ------------------------------------------------------->JMFF020P16 <---------------------------------------------------------------------rJMFF020P16 195 -------------------------------------------------->JMFF039I16 <---------------------------------------------------------------------rJMFF039I16 195 -------------------------------------------------->JMFF040L08 <---------------------------------------------------------------------rJMFF040L08 209 -------------------------------------------------------->JMFF034E14 <---------------------------------------------------------------rJMFF034E14
The following clones don't have the opposite end in this pair.
-------------------------------------------->JMSF005F10- ----------------------------------------->JMFN001D09- ----------------------------------------------------------->JMFS049F04- ------------------------------------------------------------>JMFN009G21- <--------------------------rJMSF005F12*