clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF010E24 | Sequence | 469 | 002645 (17) | emb|CDP19552.1| | 5e-12 | unnamed protein product [Coffea canephora] | 445 | 002645 (17) | emb|CDP19552.1| | 4e-12 | unnamed protein product [Coffea canephora] |
JMFF037D14 | Sequence | 446 | 002645 (17) | emb|CDP19552.1| | 6e-12 | unnamed protein product [Coffea canephora] | 423 | 002645 (17) | emb|CDP19552.1| | 5e-12 | unnamed protein product [Coffea canephora] |
JMFF039C12 | Sequence | 437 | 002645 (17) | emb|CDP19552.1| | 6e-12 | unnamed protein product [Coffea canephora] | |||||
JMFF043I10 | Sequence | 459 | 002645 (17) | emb|CDP19552.1| | 4e-12 | unnamed protein product [Coffea canephora] | 487 | 002645 (17) | emb|CDP19552.1| | 5e-12 | unnamed protein product [Coffea canephora] |
JMFF043P22 | Sequence | 469 | 002645 (17) | emb|CDP19552.1| | 6e-12 | unnamed protein product [Coffea canephora] | 446 | 002645 (17) | emb|CDP19552.1| | 6e-11 | unnamed protein product [Coffea canephora] |
JMFF045C07 | Sequence | 442 | 002645 (17) | emb|CDP19552.1| | 4e-12 | unnamed protein product [Coffea canephora] | 442 | 002645 (17) | emb|CDP19552.1| | 3e-11 | unnamed protein product [Coffea canephora] |
JMFF047D05 | Sequence | 364 | 002645 (17) | emb|CBI21837.3| | 9e-13 | unnamed protein product [Vitis vinifera] | 354 | 002645 (17) | emb|CDP19552.1| | 4e-11 | unnamed protein product [Coffea canephora] |
JMFF048P07 | Sequence | 428 | 002645 (17) | emb|CDP19552.1| | 4e-12 | unnamed protein product [Coffea canephora] | 437 | 002645 (17) | emb|CDP19552.1| | 4e-12 | unnamed protein product [Coffea canephora] |
JMSF047C06 | Sequence | 374 | 002645 (17) | emb|CBI21837.3| | 9e-13 | unnamed protein product [Vitis vinifera] | 327 | 002645 (17) | emb|CBI21837.3| | 6e-13 | unnamed protein product [Vitis vinifera] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig002645============================================ 487 1 --------------------------------------------------------------------------------------------->JMFF043I10 <---------------------------------------------------------------------------------------------------rJMFF043I10 40 ------------------------------------------------------------------------------------------->JMFF043P22 <-------------------------------------------------------------------------------------------rJMFF043P22 45 ------------------------------------------------------------------------------------------>JMFF045C07 <------------------------------------------------------------------------------------------rJMFF045C07 48 ----------------------------------------------------------------------------------->JMFF048P07 <---------------------------------------------------------------------------------------rJMFF048P07 51 ----------------------------------------------------------------------------------------------->JMFF010E24 <-----------------------------------------------------------------------------------------rJMFF010E24 63 ------------------------------------------------------------------------------------------->JMFF037D14 <--------------------------------------------------------------------------------------rJMFF037D14 123 -------------------------------------------------------------------------->JMFF047D05 <------------------------------------------------------------------------rJMFF047D05 162 ------------------------------------------------------------------------->JMSF047C06 <------------------------------------------------------------------rJMSF047C06
The following clones don't have the opposite end in this pair.
---------------------------------------------------------------------------------------->JMFF039C12-