clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF021A20 | Sequence | 621 | 004008 (15) | ref|XP_011085969.1| | 6e-50 | PREDICTED: expansin-B3-like [Sesamum indicum] | |||||
JMFF034J05 | Sequence | 485 | 004008 (15) | ref|XP_009775666.1| | 4e-40 | PREDICTED: expansin-B3 [Nicotiana sylvestris] | 775 | 004008 (15) | ref|XP_011085969.1| | 1e-95 | PREDICTED: expansin-B3-like [Sesamum indicum] |
JMFF047F12 | Sequence | 592 | 004008 (15) | ref|XP_011085969.1| | 3e-60 | PREDICTED: expansin-B3-like [Sesamum indicum] | 585 | 004008 (15) | ref|XP_010689327.1| | 9e-39 | PREDICTED: expansin-B3 [Beta vulgaris subsp. vulgaris] |
JMSF005P14 | Sequence | 268 | 004008 (15) | ref|XP_009775666.1| | 9e-05 | PREDICTED: expansin-B3 [Nicotiana sylvestris] | |||||
JMSF034K23 | Sequence | 679 | 004008 (15) | ref|XP_011085969.1| | 1e-80 | PREDICTED: expansin-B3-like [Sesamum indicum] | 630 | 004008 (15) | ref|XP_011085969.1| | 3e-62 | PREDICTED: expansin-B3-like [Sesamum indicum] |
JMSF046A12 | Sequence | 673 | 004008 (15) | ref|XP_011085969.1| | 6e-79 | PREDICTED: expansin-B3-like [Sesamum indicum] | 615 | 004008 (15) | ref|XP_011085969.1| | 6e-46 | PREDICTED: expansin-B3-like [Sesamum indicum] |
JMSF051L11 | Sequence | 681 | 004008 (15) | ref|XP_011085969.1| | 1e-80 | PREDICTED: expansin-B3-like [Sesamum indicum] | 792 | 004008 (15) | ref|XP_011085969.1| | 7e-96 | PREDICTED: expansin-B3-like [Sesamum indicum] |
JMSF052L11 | Sequence | 445 | 004008 (15) | ref|XP_009775666.1| | 4e-32 | PREDICTED: expansin-B3 [Nicotiana sylvestris] | 855 | 004008 (15) | ref|XP_011085969.1| | 2e-116 | PREDICTED: expansin-B3-like [Sesamum indicum] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig004008============================================1247 3 ---------------------------------------------->JMFF047F12 <---------------------------------------------rJMFF047F12 39 ----------------------------------------------------->JMSF034K23 <--------------------------------------------------rJMSF034K23 49 -------------------------------------->JMFF034J05 <-------------------------------------------------------------rJMFF034J05 55 ----------------------------------->JMSF052L11 <--------------------------------------------------------------------rJMSF052L11 55 ------------------------------------------------------>JMSF051L11 <-------------------------------------------------------------rJMSF051L11 62 ----------------------------------------------------->JMSF046A12 <-----------------------------------------------rJMSF046A12
The following clones don't have the opposite end in this pair.
-------------------->JMSF005P14- <-------------------------------------------------rJMFF021A20- <---------------------------rJMSF005P16*