List of clones in pair P014743.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001D24Sequence491004654 (57)ref|XP_010052458.1|2e-38PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic [Eucalyptus gran589004654 (57)ref|NP_001236541.1|2e-56uncharacterized protein LOC100306034 [Glycine max] gb|ACU14016.1| unknown [Glyci
JMFF002L19Sequence567004654 (57)ref|XP_010052458.1|2e-47PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic [Eucalyptus gran739004654 (57)gb|ACJ61487.1|3e-52oxygen-evolving enhancer protein 3 [Glycine max]
JMFF003H20Sequence527004654 (57)ref|XP_010052458.1|5e-48PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic [Eucalyptus gran736004654 (57)ref|XP_002275624.1|3e-67PREDICTED: oxygen-evolving enhancer protein 3, chloroplastic [Vitis vinifera]
JMFF006A10Sequence530004654 (57)ref|XP_010052458.1|6e-38PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic [Eucalyptus gran737004654 (57)ref|XP_002275624.1|3e-67PREDICTED: oxygen-evolving enhancer protein 3, chloroplastic [Vitis vinifera]
JMFF015L11Sequence525004654 (57)ref|XP_010052458.1|5e-48PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic [Eucalyptus gran780004654 (57)ref|NP_001236541.1|5e-67uncharacterized protein LOC100306034 [Glycine max] gb|ACU14016.1| unknown [Glyci
JMFF018A22Sequence569004654 (57)ref|XP_010052458.1|4e-47PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic [Eucalyptus gran616004654 (57)ref|NP_001236541.1|3e-63uncharacterized protein LOC100306034 [Glycine max] gb|ACU14016.1| unknown [Glyci
JMFF018N20Sequence528004654 (57)ref|XP_010052458.1|6e-38PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic [Eucalyptus gran545004654 (57)gb|ACJ61487.1|5e-59oxygen-evolving enhancer protein 3 [Glycine max]
JMFF021C03Sequence564004654 (57)ref|XP_010052458.1|1e-47PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic [Eucalyptus gran726004654 (57)ref|XP_002275624.1|1e-64PREDICTED: oxygen-evolving enhancer protein 3, chloroplastic [Vitis vinifera]
JMFF022N21Sequence511004654 (57)ref|XP_010052458.1|4e-44PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic [Eucalyptus gran723004654 (57)ref|XP_002275624.1|4e-65PREDICTED: oxygen-evolving enhancer protein 3, chloroplastic [Vitis vinifera]
JMFF026J14Sequence521004654 (57)ref|XP_010052458.1|3e-38PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic [Eucalyptus gran700004654 (57)gb|ACJ61487.1|2e-52oxygen-evolving enhancer protein 3 [Glycine max]
JMFF033I03Sequence567004654 (57)ref|XP_010052458.1|1e-47PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic [Eucalyptus gran704004654 (57)gb|ACJ61487.1|2e-52oxygen-evolving enhancer protein 3 [Glycine max]
JMFF033N10Sequence574004654 (57)ref|XP_010052458.1|3e-58PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic [Eucalyptus gran
JMFF039C08Sequence411004654 (57)ref|XP_010052458.1|5e-31PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic [Eucalyptus gran663004654 (57)ref|XP_002275624.1|4e-64PREDICTED: oxygen-evolving enhancer protein 3, chloroplastic [Vitis vinifera]
JMFF040A12Sequence564004654 (57)ref|XP_010052458.1|7e-47PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic [Eucalyptus gran782004654 (57)gb|ACJ61487.1|3e-51oxygen-evolving enhancer protein 3 [Glycine max]
JMFF044G21Sequence647004654 (57)ref|XP_010088099.1|8e-63Oxygen-evolving enhancer protein 3-2 [Morus notabilis] gb|EXB31418.1| Oxygen-evo536004654 (57)gb|ACJ61487.1|2e-58oxygen-evolving enhancer protein 3 [Glycine max]
JMFF045O07Sequence611004654 (57)ref|XP_010052458.1|3e-57PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic [Eucalyptus gran589004654 (57)gb|ACJ61487.1|3e-58oxygen-evolving enhancer protein 3 [Glycine max]
JMFF046G14Sequence552004654 (57)ref|XP_010052458.1|4e-43PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic [Eucalyptus gran502004654 (57)gb|ACJ61487.1|2e-54oxygen-evolving enhancer protein 3 [Glycine max]
JMFN042B18Sequence618004654 (57)ref|XP_010052458.1|7e-54PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic [Eucalyptus gran
JMFS103G06Sequence545004654 (57)ref|XP_010052458.1|7e-36PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic [Eucalyptus gran
JMSF002E20Sequence210004654 (57)151004654 (57)
JMSF006O08Sequence229004654 (57)ref|XP_006365879.1|2e-09PREDICTED: oxygen-evolving enhancer protein 3, chloroplastic-like [Solanum tube
JMSF008O24Sequence313004654 (57)ref|XP_010052458.1|3e-19PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic [Eucalyptus gran709004654 (57)ref|XP_002275624.1|1e-65PREDICTED: oxygen-evolving enhancer protein 3, chloroplastic [Vitis vinifera]
JMSF009H19Sequence376004654 (57)ref|XP_006365879.1|9e-17PREDICTED: oxygen-evolving enhancer protein 3, chloroplastic-like [Solanum tube744004654 (57)ref|NP_001236541.1|1e-62uncharacterized protein LOC100306034 [Glycine max] gb|ACU14016.1| unknown [Glyci
JMSF011O23Sequence289004654 (57)ref|XP_010052458.1|4e-15PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic [Eucalyptus gran732004654 (57)emb|CBI23524.3|2e-67unnamed protein product [Vitis vinifera]
JMSF019G15Sequence519004654 (57)ref|XP_010052458.1|3e-37PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic [Eucalyptus gran734004654 (57)ref|XP_010052458.1|1e-59PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic [Eucalyptus gran
JMSF022K15Sequence655004654 (57)ref|XP_010088099.1|3e-68Oxygen-evolving enhancer protein 3-2 [Morus notabilis] gb|EXB31418.1| Oxygen-evo765004654 (57)ref|XP_002275624.1|9e-67PREDICTED: oxygen-evolving enhancer protein 3, chloroplastic [Vitis vinifera]
JMSF042H08Sequence697004654 (57)ref|XP_010088099.1|9e-69Oxygen-evolving enhancer protein 3-2 [Morus notabilis] gb|EXB31418.1| Oxygen-evo753004654 (57)emb|CBI23524.3|3e-62unnamed protein product [Vitis vinifera]
JMSF046B05Sequence673004654 (57)ref|XP_010088099.1|1e-69Oxygen-evolving enhancer protein 3-2 [Morus notabilis] gb|EXB31418.1| Oxygen-evo712004654 (57)ref|XP_002275624.1|1e-65PREDICTED: oxygen-evolving enhancer protein 3, chloroplastic [Vitis vinifera]
JMSF047B05Sequence650004654 (57)ref|XP_010088099.1|1e-62Oxygen-evolving enhancer protein 3-2 [Morus notabilis] gb|EXB31418.1| Oxygen-evo727004654 (57)ref|XP_010052458.1|5e-70PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic [Eucalyptus gran

Contig 4654 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig004654============================================ 982         
   4 -------------------------------------------------------------->JMFF045O07                                        
                                             <-----------------------------------------------------------rJMFF045O07  
  62 ----------------------------------------------------->JMFF018N20                                                 
                                           <-------------------------------------------------------rJMFF018N20  
  66  --------------------------------------------------------->JMFF040A12                                            
                  <-------------------------------------------------------------------------------rJMFF040A12  
  66 --------------------------------------------------------->JMFF021C03                                             
                        <--------------------------------------------------------------------------rJMFF021C03  
  67 --------------------------------------------------------->JMFF002L19                                             
                       <---------------------------------------------------------------------------rJMFF002L19  
  70 -------------------------------------------------------->JMFF046G14                                              
                                               <--------------------------------------------------rJMFF046G14  
  74 ----------------------------------------------------->JMFF006A10                                                 
                       <--------------------------------------------------------------------------rJMFF006A10  
  81  ----------------------------------------------------->JMFF026J14                                                
                          <----------------------------------------------------------------------rJMFF026J14  
  87  --------------------------------------------------------->JMFF018A22                                            
                                 <--------------------------------------------------------------rJMFF018A22  
  98      --------------------------------------------------------------->JMFF044G21                                  
                                             <------------------------------------------------------rJMFF044G21  
  98 --------------------------------------------------------->JMFF033I03                                             
                       <-----------------------------------------------------------------------rJMFF033I03  
 100 -------------------------------------->JMSF009H19                                                                
                   <----------------------------------------------------------------------------rJMSF009H19  
 100 ---------------------------------------------------->JMSF019G15                                                  
                    <--------------------------------------------------------------------------rJMSF019G15  
 100 ---------------------------------------------------------------------->JMSF042H08                                
                    <--------------------------------------------------------------------------rJMSF042H08  
 116     ----------------------------------------------------->JMFF003H20                                             
                       <--------------------------------------------------------------------------rJMFF003H20  
 116     ----------------------------------------------------->JMFF015L11                                             
                  <------------------------------------------------------------------------------rJMFF015L11  
 122      ------------------------------------------------------------------>JMSF022K15                               
                   <------------------------------------------------------------------------------rJMSF022K15  
 123     ---------------------------------------------------->JMFF022N21                                              
                       <-------------------------------------------------------------------------rJMFF022N21  
 126     ----------------------------------------->JMFF039C08                                                         
                            <-------------------------------------------------------------------rJMFF039C08  
 130     -------------------------------------------------->JMFF001D24                                                
                                     <----------------------------------------------------------rJMFF001D24  
 139     ------------------------------->JMSF008O24                                                                   
                          <--------------------------------------------------------------------rJMSF008O24  
 153     ----------------------------->JMSF011O23                                                                     
                  <--------------------------------------------------------------------------rJMSF011O23  
 157     ------------------------------------------------------------------>JMSF047B05                                
                  <--------------------------------------------------------------------------rJMSF047B05  
 161     -------------------------------------------------------------------->JMSF046B05                              
                          <------------------------------------------------------------------rJMSF046B05  
 829                                                                           -------------------->JMSF002E20        
                                                                               <---------------rJMSF002E20

The following clones don't have the opposite end in this pair.

            --------------------------------------------------------------->JMFN042B18-                               
      ---------------------->JMSF006O08-                                                                              
       ------------------------------------------------------->JMFS103G06-                                            
     ----------------------------------------------------->JMSF013G05*                                                
          ------------------->JMSF005O16*                                                                             
         ---------------------------------------------------------->JMFF033N10-                                       
      --------------------->JMSF005O08#