clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF017F01 | Sequence | 544 | 006832 (23) | gb|AAQ23133.1| | 1e-76 | thioredoxin H2 [Ipomoea batatas] | 673 | 006832 (23) | gb|AAQ23133.1| | 5e-76 | thioredoxin H2 [Ipomoea batatas] |
JMFF018P14 | Sequence | 538 | 006832 (23) | gb|AAQ23133.1| | 2e-67 | thioredoxin H2 [Ipomoea batatas] | 630 | 006832 (23) | gb|AAQ23133.1| | 7e-67 | thioredoxin H2 [Ipomoea batatas] |
JMFF020B04 | Sequence | 497 | 006832 (23) | gb|AAQ23133.1| | 4e-77 | thioredoxin H2 [Ipomoea batatas] | 622 | 006832 (23) | gb|AAQ23133.1| | 2e-76 | thioredoxin H2 [Ipomoea batatas] |
JMFF021B08 | Sequence | 433 | 006832 (23) | gb|AAQ23133.1| | 3e-62 | thioredoxin H2 [Ipomoea batatas] | 666 | 006832 (23) | gb|AAQ23133.1| | 5e-76 | thioredoxin H2 [Ipomoea batatas] |
JMFF024E08 | Sequence | 506 | 006832 (23) | gb|AAQ23133.1| | 7e-77 | thioredoxin H2 [Ipomoea batatas] | 761 | 006832 (23) | gb|AAQ23133.1| | 2e-75 | thioredoxin H2 [Ipomoea batatas] |
JMFF033P12 | Sequence | 523 | 006832 (23) | gb|AAQ23133.1| | 1e-69 | thioredoxin H2 [Ipomoea batatas] | |||||
JMFF035A03 | Sequence | 623 | 006832 (23) | gb|AAQ23133.1| | 2e-76 | thioredoxin H2 [Ipomoea batatas] | 633 | 006832 (23) | gb|AAQ23133.1| | 2e-76 | thioredoxin H2 [Ipomoea batatas] |
JMFF039K17 | Sequence | 581 | 006832 (23) | gb|AAQ23133.1| | 2e-76 | thioredoxin H2 [Ipomoea batatas] | |||||
JMFF044B13 | Sequence | 645 | 006832 (23) | gb|AAQ23133.1| | 2e-76 | thioredoxin H2 [Ipomoea batatas] | 618 | 006832 (23) | gb|AAQ23133.1| | 3e-76 | thioredoxin H2 [Ipomoea batatas] |
JMFF046E09 | Sequence | 595 | 006832 (23) | gb|AAQ23133.1| | 9e-67 | thioredoxin H2 [Ipomoea batatas] | 621 | 006832 (23) | gb|AAQ23133.1| | 6e-70 | thioredoxin H2 [Ipomoea batatas] |
JMFF048E14 | Sequence | 261 | 006832 (23) | gb|AAQ23133.1| | 4e-25 | thioredoxin H2 [Ipomoea batatas] | 235 | 006832 (23) | |||
JMSF008P02 | Sequence | 297 | 006832 (23) | gb|AAQ23133.1| | 1e-33 | thioredoxin H2 [Ipomoea batatas] | |||||
JMSF032H12 | Sequence | 688 | 006832 (23) | gb|AAQ23133.1| | 6e-76 | thioredoxin H2 [Ipomoea batatas] | 681 | 006832 (23) | gb|AAQ23133.1| | 5e-76 | thioredoxin H2 [Ipomoea batatas] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig006832============================================ 800 45 -------------------------------------------------------------->JMFF024E08 <----------------------------------------------------------------------------------------------rJMFF024E08 118 ------------------------------------------------------------------------------------>JMSF032H12 <------------------------------------------------------------------------------------rJMSF032H12 146 ---------------------------------------------------------------->JMFF017F01 <-----------------------------------------------------------------------------------rJMFF017F01 148 ----------------------------------------------------->JMFF021B08 <---------------------------------------------------------------------------------rJMFF021B08 152 -------------------------------------------------------------------------------->JMFF044B13 <-----------------------------------------------------------------------------rJMFF044B13 161 -------------------------------->JMFF048E14 <-----------------------------rJMFF048E14 165 ----------------------------------------------------------------------------->JMFF035A03 <------------------------------------------------------------------------------rJMFF035A03 167 ------------------------------------------------------------------>JMFF018P14 <------------------------------------------------------------------------------rJMFF018P14 177 ------------------------------------------------------------->JMFF020B04 <-----------------------------------------------------------------------------rJMFF020B04 205 ------------------------------------------------------------------------->JMFF046E09 <-----------------------------------------------------------------------------rJMFF046E09
The following clones don't have the opposite end in this pair.
<-----------------------------------------------------------------rJMFF033P12- ------------------------------------>JMSF008P02- --------------------------------------------------------------------->JMFF039K17-