clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF012P15 | Sequence | 556 | 001614 (14) | dbj|BAF91445.1| | 3e-107 | PI/GLO-related transcription factor CONTORTED [Ipomoea nil] | 739 | 001614 (14) | dbj|BAF91445.1| | 8e-115 | PI/GLO-related transcription factor CONTORTED [Ipomoea nil] |
JMFF018E23 | Sequence | 557 | 001614 (14) | dbj|BAF91445.1| | 1e-123 | PI/GLO-related transcription factor CONTORTED [Ipomoea nil] | |||||
JMFF029F12 | Sequence | 498 | 001614 (14) | dbj|BAF91445.1| | 2e-90 | PI/GLO-related transcription factor CONTORTED [Ipomoea nil] | 636 | 001614 (14) | dbj|BAF91445.1| | 9e-118 | PI/GLO-related transcription factor CONTORTED [Ipomoea nil] |
JMFF029G24 | Sequence | 550 | 001614 (14) | dbj|BAF91445.1| | 5e-106 | PI/GLO-related transcription factor CONTORTED [Ipomoea nil] | 731 | 001614 (14) | dbj|BAF91445.1| | 3e-81 | PI/GLO-related transcription factor CONTORTED [Ipomoea nil] |
JMFF038N09 | Sequence | 621 | 001614 (14) | dbj|BAF91445.1| | 1e-90 | PI/GLO-related transcription factor CONTORTED [Ipomoea nil] | 637 | 001614 (14) | dbj|BAF91445.1| | 9e-118 | PI/GLO-related transcription factor CONTORTED [Ipomoea nil] |
JMFF042E18 | Sequence | 638 | 001614 (14) | dbj|BAF91445.1| | 4e-128 | PI/GLO-related transcription factor CONTORTED [Ipomoea nil] | 614 | 001614 (14) | dbj|BAF91445.1| | 5e-79 | PI/GLO-related transcription factor CONTORTED [Ipomoea nil] |
JMFN003M09 | Sequence | 528 | 001614 (14) | dbj|BAF91445.1| | 2e-57 | PI/GLO-related transcription factor CONTORTED [Ipomoea nil] | |||||
JMFN009P14 | Sequence | 592 | 001614 (14) | dbj|BAF91445.1| | 2e-121 | PI/GLO-related transcription factor CONTORTED [Ipomoea nil] | |||||
JMFS152G01 | Sequence | 619 | 001614 (14) | dbj|BAF91445.1| | 9e-132 | PI/GLO-related transcription factor CONTORTED [Ipomoea nil] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig001614============================================1043 4 ---------------------------------------------------->JMFF029G24 <----------------------------------------------------------------------rJMFF029G24 76 ----------------------------------------------------->JMFF012P15 <----------------------------------------------------------------------rJMFF012P15 79 ------------------------------------------------------------>JMFF042E18 <----------------------------------------------------------rJMFF042E18 400 ----------------------------------------------------------->JMFF038N09 <-------------------------------------------------------------rJMFF038N09 401 ----------------------------------------------->JMFF029F12 <-------------------------------------------------------------rJMFF029F12
The following clones don't have the opposite end in this pair.
-------------------------------------------------------->JMFN009P14- ----------------------------------------------------->JMFF018E23- ------------------------------------------------->JMFN003M09- ----------------------------------------------------------->JMFS152G01-