| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF004M20 | Sequence | 465 | 012977 (26) | ref|XP_002531669.1| | 2e-90 | 40S ribosomal protein S6, putative [Ricinus communis] gb|EEF30713.1| 40S ribosom | 347 | 012977 (26) | ref|XP_011003031.1| | 3e-15 | PREDICTED: 40S ribosomal protein S6-like [Populus euphratica] |
| JMFF012E22 | Sequence | 546 | 012977 (26) | ref|XP_002531669.1| | 9e-111 | 40S ribosomal protein S6, putative [Ricinus communis] gb|EEF30713.1| 40S ribosom | 210 | 012977 (26) | |||
| JMFF022A22 | Sequence | 558 | 012977 (26) | ref|XP_011022822.1| | 6e-96 | PREDICTED: 40S ribosomal protein S6 [Populus euphratica] | 790 | 012977 (26) | gb|KDP41410.1| | 2e-116 | hypothetical protein JCGZ_15817 [Jatropha curcas] |
| JMFF023I05 | Sequence | 466 | 012977 (26) | ref|XP_011022822.1| | 2e-74 | PREDICTED: 40S ribosomal protein S6 [Populus euphratica] | 749 | 012977 (26) | gb|KDP41410.1| | 4e-109 | hypothetical protein JCGZ_15817 [Jatropha curcas] |
| JMFF030M01 | Sequence | 751 | 012977 (26) | gb|KDP41410.1| | 7e-102 | hypothetical protein JCGZ_15817 [Jatropha curcas] | |||||
| JMFF046A12 | Sequence | 411 | 012977 (26) | gb|ADR71291.1| | 9e-60 | 40S ribosomal protein S6A [Hevea brasiliensis] | 212 | 012977 (26) | ref|XP_010259864.1| | 4e-07 | PREDICTED: 40S ribosomal protein S6-like isoform X1 [Nelumbo nucifera] |
| JMFN012N22 | Sequence | 627 | 012977 (26) | gb|KDP41410.1| | 5e-98 | hypothetical protein JCGZ_15817 [Jatropha curcas] | |||||
| JMFN025B03 | Sequence | 636 | 012977 (26) | gb|KDP41410.1| | 5e-118 | hypothetical protein JCGZ_15817 [Jatropha curcas] | |||||
| JMFN029F21 | Sequence | 608 | 012977 (26) | ref|XP_011022822.1| | 6e-110 | PREDICTED: 40S ribosomal protein S6 [Populus euphratica] | |||||
| JMFN038L17 | Sequence | 618 | 012977 (26) | ref|XP_011022822.1| | 3e-111 | PREDICTED: 40S ribosomal protein S6 [Populus euphratica] | |||||
| JMFN041D23 | Sequence | 607 | 012977 (26) | ref|XP_011022822.1| | 2e-113 | PREDICTED: 40S ribosomal protein S6 [Populus euphratica] | |||||
| JMFN042G23 | Sequence | 619 | 012977 (26) | ref|XP_011022822.1| | 3e-113 | PREDICTED: 40S ribosomal protein S6 [Populus euphratica] | |||||
| JMSF005J04 | Sequence | 292 | 012977 (26) | ref|XP_009780041.1| | 1e-47 | PREDICTED: 40S ribosomal protein S6 [Nicotiana sylvestris] | 356 | 012977 (26) | ref|XP_008444852.1| | 2e-27 | PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S6-like [Cucumis melo] |
| JMSF023O05 | Sequence | 606 | 012977 (26) | ref|XP_011022822.1| | 4e-106 | PREDICTED: 40S ribosomal protein S6 [Populus euphratica] | 763 | 012977 (26) | gb|KDP41410.1| | 5e-109 | hypothetical protein JCGZ_15817 [Jatropha curcas] |
| JMSF042L10 | Sequence | 684 | 012977 (26) | ref|XP_002285752.1| | 2e-72 | PREDICTED: 40S ribosomal protein S6 [Vitis vinifera] emb|CBI19191.3| unnamed pro | |||||
| JMSF043E12 | Sequence | 735 | 012977 (26) | ref|XP_009622898.1| | 2e-121 | PREDICTED: 40S ribosomal protein S6 [Nicotiana tomentosiformis] | 793 | 012977 (26) | gb|KDP41410.1| | 7e-98 | hypothetical protein JCGZ_15817 [Jatropha curcas] |
| JMSF045N23 | Sequence | 342 | 012977 (26) | emb|CDP01503.1| | 5e-56 | unnamed protein product [Coffea canephora] | |||||
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig012977============================================1000 13 ------------------------------------------------------>JMFF012E22 <--------------------rJMFF012E22 57 ---------------------------------------------->JMFF004M20 <---------------------------------rJMFF004M20 59 ---------------------------------------->JMFF046A12 <--------------------rJMFF046A12 66 ----------------------------------------------------------->JMSF023O05 <---------------------------------------------------------------------------rJMSF023O05 67 ------------------------------------------------------>JMFF022A22 <------------------------------------------------------------------------------rJMFF022A22 77 ---------------------------------------------->JMFF023I05 <--------------------------------------------------------------------------rJMFF023I05 93 ---------------------------->JMSF005J04 <-----------------------------------rJMSF005J04 195 ----------------------------------------------------------------------->JMSF043E12 <------------------------------------------------------------rJMSF043E12
The following clones don't have the opposite end in this pair.
--------------------------------->rJMSF045N23- -------------------------------------------------------------->JMFN012N22- ------------------------------------------------------------>JMFN041D23- <-------------------------------------------------------------------------rJMFF030M01- ------------------------------------------------------------->JMFN042G23- ------------------------------------------------------------>JMFN029F21- ------------------------------------------------------------->JMFN038L17- ----------------------------------------------------------->JMFN025B03- ---------------------------------------------------->JMFF012J24* <---------------------------------------------------rJMSF042L10-