clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMCP006E03 | Sequence | 628 | 002077 (15) | ref|XP_009602682.1| | 2e-71 | PREDICTED: pollen-specific protein SF3-like [Nicotiana tomentosiformis] ref|XP_0 | |||||
JMFF022D17 | Sequence | 451 | 002077 (15) | ref|XP_009602682.1| | 2e-25 | PREDICTED: pollen-specific protein SF3-like [Nicotiana tomentosiformis] ref|XP_0 | 676 | 002077 (15) | ref|XP_009602682.1| | 3e-90 | PREDICTED: pollen-specific protein SF3-like [Nicotiana tomentosiformis] ref|XP_0 |
JMFF035G10 | Sequence | 632 | 002077 (15) | ref|XP_009602682.1| | 3e-77 | PREDICTED: pollen-specific protein SF3-like [Nicotiana tomentosiformis] ref|XP_0 | |||||
JMFF051C07 | Sequence | 541 | 002077 (15) | ref|XP_009602682.1| | 9e-70 | PREDICTED: pollen-specific protein SF3-like [Nicotiana tomentosiformis] ref|XP_0 | 353 | 002077 (15) | |||
JMFN017D24 | Sequence | 547 | 002077 (15) | ref|XP_009602682.1| | 2e-57 | PREDICTED: pollen-specific protein SF3-like [Nicotiana tomentosiformis] ref|XP_0 | |||||
JMFN025N18 | Sequence | 634 | 002077 (15) | ref|XP_009602682.1| | 5e-103 | PREDICTED: pollen-specific protein SF3-like [Nicotiana tomentosiformis] ref|XP_0 | |||||
JMFN045I13 | Sequence | 592 | 002077 (15) | ref|XP_009602682.1| | 6e-76 | PREDICTED: pollen-specific protein SF3-like [Nicotiana tomentosiformis] ref|XP_0 | |||||
JMSF052C05 | Sequence | 677 | 002077 (15) | ref|XP_009602682.1| | 4e-111 | PREDICTED: pollen-specific protein SF3-like [Nicotiana tomentosiformis] ref|XP_0 | 911 | 002077 (15) | ref|XP_009602682.1| | 1e-125 | PREDICTED: pollen-specific protein SF3-like [Nicotiana tomentosiformis] ref|XP_0 |
JMSF053C05 | Sequence | 673 | 002077 (15) | ref|XP_009602682.1| | 3e-110 | PREDICTED: pollen-specific protein SF3-like [Nicotiana tomentosiformis] ref|XP_0 | 864 | 002077 (15) | ref|XP_009602682.1| | 2e-125 | PREDICTED: pollen-specific protein SF3-like [Nicotiana tomentosiformis] ref|XP_0 |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig002077============================================1161 56 ---------------------------------------------->JMFF051C07 <-----------------------------rJMFF051C07 174 --------------------------------------------------------->JMSF052C05 <------------------------------------------------------------------------------rJMSF052C05 174 --------------------------------------------------------->JMSF053C05 <--------------------------------------------------------------------------rJMSF053C05 294 ------------------>JMFF022D17 <---------------------------------------------------------rJMFF022D17
The following clones don't have the opposite end in this pair.
----------------------------->JMFN017D24- ------------------------>JMSF005A24* ------------------------------------------------------>JMFN025N18- <-----------------------------------------------------rJMFF035G10- -------------------------------------------------->JMFN045I13- ----------------------------------------------------->JMCP006E03- --------------------------------------------------------->JMSF053A09#