clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF014J13 | Sequence | 464 | 001782 (29) | gb|ADK63098.1| | 1e-42 | cinnamyl alcohol dehydrogenase [Ipomoea batatas] | 675 | 001782 (29) | ref|XP_009609570.1| | 253 | PREDICTED: 8-hydroxygeraniol dehydrogenase-like [Nicotiana tomentosiformis] ref| |
JMFF015P04 | Sequence | 472 | 001782 (29) | gb|ADK63098.1| | 7e-44 | cinnamyl alcohol dehydrogenase [Ipomoea batatas] | 763 | 001782 (29) | ref|XP_009609570.1| | 284 | PREDICTED: 8-hydroxygeraniol dehydrogenase-like [Nicotiana tomentosiformis] ref| |
JMFF017N07 | Sequence | 559 | 001782 (29) | gb|ACJ61779.1| | 6e-63 | ELI3, partial [Nicotiana benthamiana] | 716 | 001782 (29) | ref|XP_009759254.1| | 274 | PREDICTED: 8-hydroxygeraniol dehydrogenase-like [Nicotiana sylvestris] |
JMFF020G05 | Sequence | 521 | 001782 (29) | gb|ADK63098.1| | 1e-68 | cinnamyl alcohol dehydrogenase [Ipomoea batatas] | 750 | 001782 (29) | ref|XP_009609570.1| | 276 | PREDICTED: 8-hydroxygeraniol dehydrogenase-like [Nicotiana tomentosiformis] ref| |
JMFF024F04 | Sequence | 501 | 001782 (29) | ref|XP_002534365.1| | 6e-49 | alcohol dehydrogenase, putative [Ricinus communis] gb|EEF28016.1| alcohol dehydr | 790 | 001782 (29) | ref|XP_009609570.1| | 305 | PREDICTED: 8-hydroxygeraniol dehydrogenase-like [Nicotiana tomentosiformis] ref| |
JMFF025L10 | Sequence | 601 | 001782 (29) | gb|ACJ61779.1| | 5e-73 | ELI3, partial [Nicotiana benthamiana] | 761 | 001782 (29) | ref|XP_009609570.1| | 284 | PREDICTED: 8-hydroxygeraniol dehydrogenase-like [Nicotiana tomentosiformis] ref| |
JMFF029O17 | Sequence | 534 | 001782 (29) | gb|ADK63098.1| | 5e-40 | cinnamyl alcohol dehydrogenase [Ipomoea batatas] | 746 | 001782 (29) | ref|XP_009609570.1| | 273 | PREDICTED: 8-hydroxygeraniol dehydrogenase-like [Nicotiana tomentosiformis] ref| |
JMFF030M13 | Sequence | 610 | 001782 (29) | ref|XP_009609570.1| | 220 | PREDICTED: 8-hydroxygeraniol dehydrogenase-like [Nicotiana tomentosiformis] ref| | |||||
JMFF034M04 | Sequence | 547 | 001782 (29) | gb|ADK63098.1| | 2e-41 | cinnamyl alcohol dehydrogenase [Ipomoea batatas] | 722 | 001782 (29) | ref|XP_009759254.1| | 278 | PREDICTED: 8-hydroxygeraniol dehydrogenase-like [Nicotiana sylvestris] |
JMFF043K18 | Sequence | 618 | 001782 (29) | gb|ADK63098.1| | 5e-106 | cinnamyl alcohol dehydrogenase [Ipomoea batatas] | 605 | 001782 (29) | ref|XP_009598030.1| | 203 | PREDICTED: 8-hydroxygeraniol dehydrogenase-like, partial [Nicotiana tomentosifo |
JMFF047I02 | Sequence | 452 | 001782 (29) | gb|AGY96956.1| | 1e-21 | mannitol dehydrogenase 1 [Vitis vinifera] | 418 | 001782 (29) | ref|XP_009598030.1| | 86.7 | PREDICTED: 8-hydroxygeraniol dehydrogenase-like, partial [Nicotiana tomentosifo |
JMFS124E11 | Sequence | 571 | 001782 (29) | gb|ADK63098.1| | 2e-101 | cinnamyl alcohol dehydrogenase [Ipomoea batatas] | |||||
JMFS151A11 | Sequence | 621 | 001782 (29) | gb|ADK63098.1| | 7e-106 | cinnamyl alcohol dehydrogenase [Ipomoea batatas] | |||||
JMSF013P15 | Sequence | 500 | 001782 (29) | gb|ADK63098.1| | 1e-74 | cinnamyl alcohol dehydrogenase [Ipomoea batatas] | 746 | 001782 (29) | ref|XP_009609570.1| | 277 | PREDICTED: 8-hydroxygeraniol dehydrogenase-like [Nicotiana tomentosiformis] ref| |
JMSF041E23 | Sequence | 772 | 001782 (29) | gb|ADK63098.1| | 1e-105 | cinnamyl alcohol dehydrogenase [Ipomoea batatas] | 650 | 001782 (29) | ref|XP_009609570.1| | 250 | PREDICTED: 8-hydroxygeraniol dehydrogenase-like [Nicotiana tomentosiformis] ref| |
JMSF041L23 | Sequence | 742 | 001782 (29) | gb|ADK63098.1| | 3e-100 | cinnamyl alcohol dehydrogenase [Ipomoea batatas] | 662 | 001782 (29) | ref|XP_009598030.1| | 220 | PREDICTED: 8-hydroxygeraniol dehydrogenase-like, partial [Nicotiana tomentosifo |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig001782============================================1640 1 --------------------------->JMFF047I02 <------------------------rJMFF047I02 54 -------------------------------->JMFF029O17 <--------------------------------------------rJMFF029O17 54 -------------------------------->JMFF034M04 <-------------------------------------------rJMFF034M04 144 --------------------------->JMFF014J13 <----------------------------------------rJMFF014J13 144 ---------------------------->JMFF015P04 <---------------------------------------------rJMFF015P04 160 -------------------------------------------->JMSF041L23 <---------------------------------------rJMSF041L23 168 ---------------------------------------------->JMSF041E23 <--------------------------------------rJMSF041E23 242 ------------------------------->JMFF020G05 <---------------------------------------------rJMFF020G05 275 ------------------------------------->JMFF043K18 <-----------------------------------rJMFF043K18 284 --------------------------------->JMFF017N07 <-------------------------------------------rJMFF017N07 285 ------------------------------------>JMFF025L10 <---------------------------------------------rJMFF025L10 286 ------------------------------>JMFF024F04 <-----------------------------------------------rJMFF024F04 308 ----------------------------->JMSF013P15 <-------------------------------------------rJMSF013P15
The following clones don't have the opposite end in this pair.
---------------------------------->JMFS124E11- <------------------------------------rJMFF030M13- ------------------------------------->JMFS151A11-