| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF004E12 | Sequence | 624 | 006453 (15) | ref|XP_006340751.1| | 2e-118 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog isoform X3 [S | 677 | 006453 (15) | ref|XP_010316428.1| | 3e-44 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog isoform X1 [S |
| JMFF023M18 | Sequence | 494 | 006453 (15) | ref|XP_006340751.1| | 2e-100 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog isoform X3 [S | 735 | 006453 (15) | ref|XP_010316428.1| | 7e-54 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog isoform X1 [S |
| JMFF035G19 | Sequence | 616 | 006453 (15) | ref|XP_006340749.1| | 1e-117 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog isoform X1 [S | 745 | 006453 (15) | ref|XP_010316428.1| | 2e-52 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog isoform X1 [S |
| JMFF035M07 | Sequence | 580 | 006453 (15) | ref|XP_006340751.1| | 5e-108 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog isoform X3 [S | 735 | 006453 (15) | ref|XP_010316428.1| | 7e-50 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog isoform X1 [S |
| JMFF042M15 | Sequence | 659 | 006453 (15) | gb|KHN08386.1| | 1e-119 | 26S proteasome non-ATPase regulatory subunit 4 [Glycine soja] | 612 | 006453 (15) | ref|XP_010316428.1| | 5e-43 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog isoform X1 [S |
| JMFS060H10 | Sequence | 642 | 006453 (15) | ref|XP_006340751.1| | 3e-112 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog isoform X3 [S | |||||
| JMSF011K22 | Sequence | 276 | 006453 (15) | gb|KCW53172.1| | 2e-48 | hypothetical protein EUGRSUZ_J02453 [Eucalyptus grandis] gb|KCW53173.1| hypothet | 711 | 006453 (15) | ref|XP_010316428.1| | 6e-54 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog isoform X1 [S |
| JMSF014N17 | Sequence | 423 | 006453 (15) | ref|XP_011099843.1| | 2e-83 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog isoform X1 [S | 774 | 006453 (15) | ref|XP_010316428.1| | 1e-66 | PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog isoform X1 [S |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig006453============================================1540 6 --------------------------------------->JMFF004E12 <-------------------------------------------rJMFF004E12 41 ----------------->JMSF011K22 <---------------------------------------------rJMSF011K22 47 ------------------------------------------>JMFF042M15 <---------------------------------------rJMFF042M15 61 --------------------------------------->JMFF035G19 <-----------------------------------------------rJMFF035G19 70 ------------------------------->JMFF023M18 <-----------------------------------------------rJMFF023M18 70 ------------------------------------->JMFF035M07 <----------------------------------------------rJMFF035M07 127 -------------------------->JMSF014N17 <-------------------------------------------------rJMSF014N17
The following clones don't have the opposite end in this pair.
----------------------------------------->JMFS060H10-