clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF005I15 | Sequence | 466 | 004460 (11) | ref|XP_008238242.1| | 74.3 | PREDICTED: uncharacterized protein LOC103336889 [Prunus mume] | 637 | 004460 (11) | ref|XP_008238242.1| | 74.7 | PREDICTED: uncharacterized protein LOC103336889 [Prunus mume] |
JMFF006M02 | Sequence | 536 | 004460 (11) | ref|XP_008238242.1| | 74.7 | PREDICTED: uncharacterized protein LOC103336889 [Prunus mume] | 637 | 004460 (11) | ref|XP_008238242.1| | 74.7 | PREDICTED: uncharacterized protein LOC103336889 [Prunus mume] |
JMFF007H10 | Sequence | 525 | 004460 (11) | ref|XP_008238242.1| | 74.3 | PREDICTED: uncharacterized protein LOC103336889 [Prunus mume] | 590 | 004460 (11) | ref|XP_008238242.1| | 75.1 | PREDICTED: uncharacterized protein LOC103336889 [Prunus mume] |
JMFF008K14 | Sequence | 534 | 004460 (11) | ref|XP_008238242.1| | 74.7 | PREDICTED: uncharacterized protein LOC103336889 [Prunus mume] | 638 | 004460 (11) | ref|XP_008238242.1| | 75.1 | PREDICTED: uncharacterized protein LOC103336889 [Prunus mume] |
JMFF048B14 | Sequence | 420 | 004460 (11) | ref|XP_010104295.1| | 1e-13 | hypothetical protein L484_023244 [Morus notabilis] gb|EXB99715.1| hypothetical p | 372 | 004460 (11) | ref|XP_010252234.1| | 1e-05 | PREDICTED: uncharacterized protein LOC104593877 isoform X1 [Nelumbo nucifera] |
JMFN037C15 | Sequence | 583 | 004460 (11) | ref|XP_010252235.1| | 7e-08 | PREDICTED: uncharacterized protein LOC104593877 isoform X2 [Nelumbo nucifera] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig004460============================================ 637 1 ------------------------------------------------------------------------>JMFF005I15 <---------------------------------------------------------------------------------------------------rJMFF005I15 1 ----------------------------------------------------------------------------------->JMFF006M02 <---------------------------------------------------------------------------------------------------rJMFF006M02 1 ----------------------------------------------------------------------------------->JMFF008K14 <--------------------------------------------------------------------------------------------------rJMFF008K14 47 --------------------------------------------------------------------------------->JMFF007H10 <--------------------------------------------------------------------------------------------rJMFF007H10 219 ----------------------------------------------------------------->JMFF048B14 <--------------------rJMFF048B14
The following clones don't have the opposite end in this pair.
------------------------------------------------------------->JMFN037C15-