| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMCP003B06 | Sequence | 224 | 003052 (19) | ref|XP_011082984.1| | 4e-07 | PREDICTED: 60S ribosomal protein L11 [Sesamum indicum] | |||||
| JMCP005H02 | Sequence | 240 | 003052 (19) | ref|XP_011082984.1| | 4e-07 | PREDICTED: 60S ribosomal protein L11 [Sesamum indicum] | |||||
| JMCP017D08 | Sequence | 341 | 003052 (19) | ref|XP_011082984.1| | 1e-06 | PREDICTED: 60S ribosomal protein L11 [Sesamum indicum] | |||||
| JMFF003B23 | Sequence | 518 | 003052 (19) | ref|XP_010246451.1| | 2e-97 | PREDICTED: 60S ribosomal protein L11-like [Nelumbo nucifera] | 683 | 003052 (19) | gb|KDP21119.1| | 6e-96 | hypothetical protein JCGZ_21590 [Jatropha curcas] |
| JMFF013E14 | Sequence | 542 | 003052 (19) | ref|XP_006414065.1| | 5e-86 | hypothetical protein EUTSA_v10026344mg [Eutrema salsugineum] gb|ESQ55518.1| hypo | |||||
| JMFF024K03 | Sequence | 492 | 003052 (19) | ref|XP_009383242.1| | 1e-91 | PREDICTED: 60S ribosomal protein L11 [Musa acuminata subsp. malaccensis] | 818 | 003052 (19) | gb|KDP21119.1| | 3e-108 | hypothetical protein JCGZ_21590 [Jatropha curcas] |
| JMFF029B09 | Sequence | 517 | 003052 (19) | ref|XP_010246451.1| | 3e-97 | PREDICTED: 60S ribosomal protein L11-like [Nelumbo nucifera] | 772 | 003052 (19) | ref|XP_002510391.1| | 8e-114 | 60S ribosomal protein L11, putative [Ricinus communis] gb|EEF52578.1| 60S riboso |
| JMFF032K15 | Sequence | 547 | 003052 (19) | gb|KDP21119.1| | 3e-94 | hypothetical protein JCGZ_21590 [Jatropha curcas] | 726 | 003052 (19) | gb|KDP21119.1| | 1e-106 | hypothetical protein JCGZ_21590 [Jatropha curcas] |
| JMFF040J08 | Sequence | 517 | 003052 (19) | ref|XP_010246451.1| | 2e-97 | PREDICTED: 60S ribosomal protein L11-like [Nelumbo nucifera] | 674 | 003052 (19) | gb|KDP21119.1| | 2e-115 | hypothetical protein JCGZ_21590 [Jatropha curcas] |
| JMFF049H11 | Sequence | 630 | 003052 (19) | ref|XP_002510391.1| | 9e-116 | 60S ribosomal protein L11, putative [Ricinus communis] gb|EEF52578.1| 60S riboso | 601 | 003052 (19) | ref|XP_002510391.1| | 1e-92 | 60S ribosomal protein L11, putative [Ricinus communis] gb|EEF52578.1| 60S riboso |
| JMFN003A24 | Sequence | 626 | 003052 (19) | ref|XP_009138940.1| | 9e-115 | PREDICTED: 60S ribosomal protein L11-1-like [Brassica rapa] emb|CDX88999.1| BnaA | |||||
| JMFN008K16 | Sequence | 624 | 003052 (19) | gb|EYU21905.1| | 7e-72 | hypothetical protein MIMGU_mgv1a014651mg [Erythranthe guttata] | |||||
| JMFN042B17 | Sequence | 627 | 003052 (19) | ref|XP_009138940.1| | 5e-115 | PREDICTED: 60S ribosomal protein L11-1-like [Brassica rapa] emb|CDX88999.1| BnaA | |||||
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig003052============================================ 896 15 ------------------------------------------------------>JMFF024K03 <-----------------------------------------------------------------------------------------rJMFF024K03 48 --------------------------------------------------------->JMFF003B23 <---------------------------------------------------------------------------rJMFF003B23 49 ------------------------------------------------------------>JMFF032K15 <--------------------------------------------------------------------------------rJMFF032K15 69 --------------------------------------------------------->JMFF029B09 <-------------------------------------------------------------------------------------rJMFF029B09 123 --------------------------------------------------------------------->JMFF049H11 <------------------------------------------------------------------rJMFF049H11 167 --------------------------------------------------------->JMFF040J08 <--------------------------------------------------------------------------rJMFF040J08
The following clones don't have the opposite end in this pair.
------------------------------------->rJMCP017D08- ------------------------>JMCP003B06- <-----------------------------------------------------------rJMFF013E14- -------------------------------------------------------------------->JMFN008K16- -------------------------->JMCP005H02- --------------------------------------------------------------------->JMFN003A24- --------------------------------------------------------------------->JMFN042B17-