clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF014F12 | Sequence | 556 | 011637 (23) | gb|AAB02052.1| | 3e-91 | manganese superoxide dismutase [Carica papaya] | 745 | 011637 (23) | gb|AAB02052.1| | 3e-107 | manganese superoxide dismutase [Carica papaya] |
JMFF015K20 | Sequence | 572 | 011637 (23) | gb|AAB02052.1| | 4e-102 | manganese superoxide dismutase [Carica papaya] | 710 | 011637 (23) | gb|AAB02052.1| | 2e-77 | manganese superoxide dismutase [Carica papaya] |
JMFF017O18 | Sequence | 563 | 011637 (23) | gb|AAB02052.1| | 3e-68 | manganese superoxide dismutase [Carica papaya] | 737 | 011637 (23) | gb|AAB02052.1| | 1e-81 | manganese superoxide dismutase [Carica papaya] |
JMFF018C10 | Sequence | 555 | 011637 (23) | gb|AAB02052.1| | 3e-91 | manganese superoxide dismutase [Carica papaya] | 754 | 011637 (23) | gb|AAB02052.1| | 1e-109 | manganese superoxide dismutase [Carica papaya] |
JMFF025D18 | Sequence | 577 | 011637 (23) | gb|AAB02052.1| | 2e-96 | manganese superoxide dismutase [Carica papaya] | 745 | 011637 (23) | gb|AAB02052.1| | 1e-109 | manganese superoxide dismutase [Carica papaya] |
JMFF025H16 | Sequence | 575 | 011637 (23) | gb|AAB02052.1| | 9e-96 | manganese superoxide dismutase [Carica papaya] | 796 | 011637 (23) | gb|AAB02052.1| | 4e-124 | manganese superoxide dismutase [Carica papaya] |
JMFF040I21 | Sequence | 522 | 011637 (23) | gb|AAB02052.1| | 1e-82 | manganese superoxide dismutase [Carica papaya] | 683 | 011637 (23) | gb|AAB02052.1| | 3e-73 | manganese superoxide dismutase [Carica papaya] |
JMFF043C13 | Sequence | 630 | 011637 (23) | gb|AAB02052.1| | 2e-96 | manganese superoxide dismutase [Carica papaya] | 545 | 011637 (23) | gb|AAA85342.1| | 1e-45 | Mn-superoxide dismutase, partial [Ipomoea batatas] |
JMFF047L16 | Sequence | 573 | 011637 (23) | gb|AAB02052.1| | 8e-90 | manganese superoxide dismutase [Carica papaya] | |||||
JMFF048I10 | Sequence | 421 | 011637 (23) | gb|ABH11434.2| | 3e-60 | Mn-superoxide dismutase II [Helianthus annuus] | 267 | 011637 (23) | |||
JMFF050D02 | Sequence | 629 | 011637 (23) | gb|AAB02052.1| | 6e-99 | manganese superoxide dismutase [Carica papaya] | |||||
JMFN008A20 | Sequence | 621 | 011637 (23) | gb|AAB02052.1| | 4e-116 | manganese superoxide dismutase [Carica papaya] | |||||
JMFN025I10 | Sequence | 618 | 011637 (23) | gb|AAB02052.1| | 3e-89 | manganese superoxide dismutase [Carica papaya] | |||||
JMFN029B19 | Sequence | 640 | 011637 (23) | gb|AAB02052.1| | 1e-120 | manganese superoxide dismutase [Carica papaya] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig011637============================================1043 2 ---------------------------------------->JMFF048I10 <-------------------------rJMFF048I10 28 ----------------------------------------------------->JMFF014F12 <----------------------------------------------------------------------rJMFF014F12 28 ----------------------------------------------------->JMFF018C10 <-----------------------------------------------------------------------rJMFF018C10 32 ---------------------------------------------------------->JMFF043C13 <--------------------------------------------------rJMFF043C13 35 ------------------------------------------------->JMFF040I21 <-----------------------------------------------------------------rJMFF040I21 35 ------------------------------------------------------->JMFF025D18 <-----------------------------------------------------------------------rJMFF025D18 36 ------------------------------------------------------>JMFF017O18 <----------------------------------------------------------------------rJMFF017O18 36 ------------------------------------------------------->JMFF025H16 <----------------------------------------------------------------------------rJMFF025H16 97 ------------------------------------------------------>JMFF015K20 <-------------------------------------------------------------------rJMFF015K20
The following clones don't have the opposite end in this pair.
----------------------------------------------------------->JMFF050D02- ----------------------------------------------------------->JMFN008A20- ------------------------------------------------------------->JMFN029B19- ----------------------------------------------------------->JMFN025I10- ----------------------------------------------------->JMFF047L16-